Fitness for 5 genes in Bacteroides thetaiotaomicron VPI-5482

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500 ntBT3665 and BT3666 are separated by 11 nucleotidesBT3666 and BT3667 are separated by 76 nucleotidesBT3667 and BT3668 are separated by 216 nucleotidesBT3668 and BT3669 are separated by 80 nucleotides BT3665: BT3665 - alpha-L-fucosidase precursor (NCBI ptt file), at 4,754,745 to 4,756,388 BT3665 BT3666: BT3666 - conserved hypothetical protein (NCBI ptt file), at 4,756,400 to 4,756,789 BT3666 BT3667: BT3667 - transcriptional regulator (NCBI ptt file), at 4,756,866 to 4,757,726 BT3667 BT3668: BT3668 - hypothetical protein (NCBI ptt file), at 4,757,943 to 4,758,677 BT3668 BT3669: BT3669 - conserved hypothetical protein (NCBI ptt file), at 4,758,758 to 4,759,348 BT3669
Group Condition BT3665 BT3666 BT3667 BT3668 BT3669
stress Varel_Bryant_medium_Glucose with Chlorpromazine 0.1 mM -0.3 -0.3 -0.0 -0.1 -1.8
stress BHIS with Simvastatin 30 uM -0.1 -0.3 +0.1 -0.1 -1.8
stress BHIS with Simvastatin 30 uM -0.3 +0.0 +0.1 -0.2 -1.7
stress BHIS with DAMPA 60 uM -0.1 -0.1 +0.0 -0.6 -1.4
phage SJC03_cps7_0.1MOI -0.1 -0.6 -0.1 -0.3 -0.8
stress BHIS with Sulfamonomethoxine 0.1 mM +0.1 -0.4 -0.0 -0.1 -1.5
carbon source Heparin from porcine intestinal mucosa (C) -0.4 -0.5 -0.1 -0.3 -0.5
stress Varel_Bryant_medium_Glucose with Phenazine ethosulfate 0.2 mM -0.1 -0.4 -0.2 -0.1 -1.0
carbon source a-Cyclodextrin 2.5 mg/ml (C) -0.3 +0.1 +0.2 -0.7 -0.9
stress Varel_Bryant_medium_Glucose with Sulfamethizole 0.1 mM +0.1 -0.3 -0.3 +0.2 -1.2
phage DAC16_cps7_10MOI +0.2 -0.5 +0.0 -0.4 -0.7
phage SJC16_cps8_1MOI +0.2 -0.3 +0.4 +0.3 -1.8
mouse_post_colonization Post-colonization (Day 14) - Cage7;Mouse3 -0.3 -0.1 +0.3 -0.9 -0.2
stress BHIS with Trimethoprim 0.00625 mM -0.2 +0.2 +0.3 -0.2 -1.2
mouse_peg_treatment PEG (Day 3) - Cage3;Mouse2 -0.0 +0.4 -0.2 -1.2 -0.2
stress BHIS with Cefoxitin 0.0125 mM +0.3 -0.1 +0.1 +0.2 -1.4
stress BHIS with Trimethoprim 0.00625 mM +0.3 -0.2 +0.3 -0.1 -1.0
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_DTT_noNitrogen +0.1 -0.5 +0.6 -0.0 -0.9
stress BHIS with Thioridazine 0.025 mM -0.0 -0.4 +0.1 +0.7 -1.0
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen +0.3 -0.4 +0.4 -0.4 -0.5
stress BHIS with Chlorpromazine 0.2 mM +0.2 -0.4 +0.4 +0.2 -0.8
stress Varel_Bryant_medium_Glucose with Furaltadone 0.1 mM -0.1 +0.7 -0.1 -0.2 -0.7
stress BHIS with 5-Fluorouracil 0.1 mM +0.2 +0.0 +0.5 -0.0 -1.2
stress BHIS with Sulfamethizole 0.1 mM +0.3 +0.4 +0.1 +0.1 -1.2
mouse_post_colonization Post-colonization (Day 1) - Cage1;Mouse3 +0.3 -0.5 +0.2 +0.2 -0.6
stress BHIS with Doxycycline hyclate 0.000390625 mM -0.2 +0.5 +0.1 +0.6 -1.2
mouse Post-colonization (Day 7) - Cage1B;Mouse5 -0.1 +0.3 -0.2 -0.8 +0.6
stress BHIS with Chlorpromazine 0.1 mM +0.5 -0.6 +0.3 +0.2 -0.4
stress BHIS with Irgasan 0.0125 mM +0.3 -0.4 +0.3 +0.3 -0.6
survival aerobic shaking 48 hr copy A +0.2 -0.3 +0.6 +0.9 -0.6
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