Fitness for 5 genes in Bacteroides thetaiotaomicron VPI-5482

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500 ntBT3511 and BT3512 are separated by 97 nucleotidesBT3512 and BT3513 are separated by 13 nucleotidesBT3513 and BT3514 are separated by 294 nucleotidesBT3514 and BT3515 overlap by 4 nucleotides BT3511: BT3511 - hypothetical protein (NCBI ptt file), at 4,530,316 to 4,530,819 BT3511 BT3512: BT3512 - glutaminase A (NCBI ptt file), at 4,530,917 to 4,533,430 BT3512 BT3513: BT3513 - beta-galactosidase (NCBI ptt file), at 4,533,444 to 4,535,258 BT3513 BT3514: BT3514 - conserved hypothetical protein (NCBI ptt file), at 4,535,553 to 4,538,501 BT3514 BT3515: BT3515 - putatuve glycosylhydrolase (NCBI ptt file), at 4,538,498 to 4,539,667 BT3515
Group Condition BT3511 BT3512 BT3513 BT3514 BT3515
mouse_post_colonization Post-colonization (Day 8) - Cage1;Mouse4 -0.5 -0.2 -0.0 -0.1 -1.2
mouse_post_colonization Post-colonization (Day 14) - Cage7;Mouse3 -0.6 +0.0 -0.2 -0.1 -1.1
mouse_peg_treatment PEG (Day 1) - Cage4;Mouse1 -0.9 +0.1 +0.1 +0.1 -1.4
mouse_recovery_after_peg Post-colonization (Day 14) - Cage4;Mouse2 -0.7 -0.3 +0.2 +0.2 -1.2
mouse_post_colonization Post-colonization (Day 12) - Cage7;Mouse3 -0.5 +0.1 -0.1 -0.0 -1.3
mouse_post_colonization Post-colonization (Day 14) - Cage3;Mouse3 -0.2 +0.0 -0.1 -0.1 -1.4
mouse_peg_treatment PEG (Day 1) - Cage2;Mouse1 -0.3 -0.1 -0.1 -0.0 -1.4
mouse_post_colonization Post-colonization (Day 14) - Cage4;Mouse4 -0.4 -0.1 -0.1 +0.0 -1.2
mouse_peg_treatment PEG (Day 1 ) - Cage1;Mouse5 -0.8 +0.2 -0.2 +0.1 -1.0
mouse_post_colonization Post-colonization (Day 12) - Cage2;Mouse1 -0.3 -0.1 -0.0 +0.0 -1.3
mouse_post_colonization Post-colonization (Day 12) - Cage7;Mouse1 -0.3 -0.1 -0.1 +0.1 -1.3
mouse_post_colonization Post-colonization (Day 12) - Cage1;Mouse3 -0.1 +0.1 -0.2 +0.0 -1.5
mouse_post_colonization Post-colonization (Day 10) - Cage5;Mouse5 -0.4 +0.0 +0.0 +0.1 -1.4
mouse_peg_treatment PEG (Day 2) - Cage3;Mouse3 -0.2 +0.1 +0.0 -0.0 -1.4
mouse_peg_treatment PEG (Day 1) - Cage3;Mouse1 -0.2 +0.2 +0.0 -0.1 -1.5
mouse_post_colonization Post-colonization (Day 14) - Cage5;Mouse1 -0.8 -0.2 +0.2 +0.1 -0.8
mouse_post_colonization Post-colonization (Day 14) - Cage3;Mouse1 -0.1 +0.0 +0.1 +0.2 -1.7
mouse_post_colonization Post-colonization (Day 8) - Cage6;Mouse2 -0.4 -0.1 -0.2 +0.2 -0.9
mouse_post_colonization Post-colonization (Day 8) - Cage3;Mouse4 -0.6 -0.3 +0.1 +0.0 -0.8
mouse_post_colonization Post-colonization (Day 12) - Cage4;Mouse5 -0.3 -0.1 +0.1 +0.1 -1.1
mouse_post_colonization Post-colonization (Day 12) - Cage5;Mouse4 -0.6 +0.1 +0.1 +0.1 -1.1
mouse_post_colonization Post-colonization (Day 12) - Cage4;Mouse1 -0.4 -0.1 +0.2 -0.1 -0.9
mouse_post_colonization Post-colonization (Day 8) - Cage5;Mouse5 -0.3 +0.1 -0.1 +0.1 -1.1
mouse_peg_treatment PEG (Day 1) - Cage3;Mouse4 +0.1 +0.2 -0.1 +0.1 -1.5
mouse_post_colonization Post-colonization (Day 12) - Cage3;Mouse4 -0.1 -0.1 +0.2 +0.1 -1.2
mouse_peg_treatment PEG (Day 2) - Cage4;Mouse1 -0.3 +0.2 +0.2 -0.1 -1.2
mouse_post_colonization Post-colonization (Day 12) - Cage5;Mouse2 -0.2 +0.2 +0.1 +0.0 -1.2
mouse_peg_treatment PEG (Day 3) - Cage2;Mouse1 -0.2 +0.0 +0.4 +0.0 -1.1
mouse_peg_treatment PEG (Day 2) - Cage5;Mouse1 -0.5 +0.1 +0.4 +0.1 -1.0
stress BHIS with Simvastatin 30 uM -0.6 -0.2 -0.5 -0.1 +0.7
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