Fitness for 5 genes in Bacteroides thetaiotaomicron VPI-5482

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500 ntBT3493 and BT3494 overlap by 1 nucleotidesBT3494 and BT3495 are separated by 13 nucleotidesBT3495 and BT3496 are separated by 20 nucleotidesBT3496 and BT3497 are separated by 83 nucleotides BT3493: BT3493 - putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file), at 4,505,128 to 4,505,928 BT3493 BT3494: BT3494 - putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file), at 4,505,928 to 4,508,261 BT3494 BT3495: BT3495 - putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file), at 4,508,275 to 4,510,341 BT3495 BT3496: BT3496 - hypothetical protein (NCBI ptt file), at 4,510,362 to 4,511,360 BT3496 BT3497: BT3497 - conserved hypothetical protein (NCBI ptt file), at 4,511,444 to 4,512,199 BT3497
Group Condition BT3493 BT3494 BT3495 BT3496 BT3497
stress Varel_Bryant_medium_Glucose with Sulfamonomethoxine 0.2 mM -0.4 -0.6 +0.0 -0.3 -0.3
stress Varel_Bryant_medium_Glucose with Vancomycin Hydrochloride from Streptomyces orientalis 0.00625 mM -0.5 -0.3 -0.3 -0.3 -0.1
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_DTT_noNitrogen -1.0 -0.2 -0.2 +0.1 -0.3
stress Varel_Bryant_medium_Glucose with Econazole nitrate salt 0.025 mM -0.7 -0.4 -0.1 -0.1 -0.3
stress BHIS with Benzethonium chloride 0.002 mM -0.4 -0.2 -0.3 -0.2 -0.4
stress Varel_Bryant_medium_Glucose with Phenazine ethosulfate 0.2 mM -0.5 -0.2 -0.2 -0.4 -0.1
carbon source D-Trehalose 20mM (C) -0.3 -0.2 -0.2 -0.5 -0.3
stress BHIS with Simvastatin 30 uM -0.7 +0.0 +0.1 -0.2 -0.5
carbon source L-Rhamnose (C) -0.5 -0.2 -0.2 +0.1 -0.5
carbon source Heparin from porcine intestinal mucosa (C) -0.7 -0.2 -0.3 +0.4 -0.3
stress BHIS with 5-Fluorouracil 0.1 mM -0.5 +0.1 -0.3 +0.4 -0.8
stress BHIS with Chenodeoxycholic 0.25 mg/ml -0.4 -0.3 -0.3 -0.3 +0.2
phage ARB14_cps1_0.1MOI -0.5 -0.1 -0.6 +0.3 -0.1
stress BHIS with Paraquat dichloride 0.1 mg/ml -0.4 +0.0 -0.1 +0.2 -0.7
stress Varel_Bryant_medium_Glucose with Trimethoprim 0.025 mM +0.1 -0.1 -0.1 +0.2 -1.0
stress BHIS with Deoxycholic 0.2 mg/ml -0.3 -0.3 -0.3 -0.5 +0.5
stress BHIS with Thioridazine 0.025 mM -0.4 -0.1 -0.3 +0.3 -0.3
stress BHIS with Trimethoprim 0.0125 mM -0.2 -0.1 -0.2 +0.4 -0.8
carbon source Heparin from porcine intestinal mucosa (C) -0.4 +0.0 -0.2 +0.4 -0.6
stress Varel_Bryant_medium_Glucose with Deoxycholic 0.075 mg/ml -0.3 -0.1 -0.1 +0.3 -0.6
stress BHIS with Thioridazine 0.0125 mM -0.4 -0.2 -0.2 +0.4 -0.2
stress BHIS with Chlorpromazine 0.1 mM -0.1 +0.0 -0.5 +0.4 -0.5
stress BHIS with Trimethoprim 0.00625 mM -0.4 +0.1 -0.2 +0.5 -0.5
mouse_post_colonization Post-colonization (Day 14) - Cage5;Mouse4 -0.5 -0.1 -0.0 +0.6 -0.4
stress BHIS with Trimethoprim 0.00625 mM -0.2 +0.0 -0.1 +0.6 -0.7
survival aerobic shaking 48 hr copy A +0.1 -0.3 +0.0 +0.4 -0.4
phage SJC15_cps8_1MOI -0.3 -0.2 -0.0 +0.7 -0.2
stress BHIS with 5-Fluorouracil 0.1 mM +0.2 +0.1 -0.0 +0.6 -0.7
stress BHIS with Dimetridazole 0.00625 mM -0.4 +0.1 -0.2 +0.4 +0.3
phage DAC23_cps8_10MOI -0.3 +0.2 -0.3 +0.7 +0.1
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