Fitness for 5 genes in Bacteroides thetaiotaomicron VPI-5482

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500 ntBT3381 and BT3382 are separated by 30 nucleotidesBT3382 and BT3383 are separated by 19 nucleotidesBT3383 and BT3384 are separated by 229 nucleotidesBT3384 and BT3385 are separated by 640 nucleotides BT3381: BT3381 - hypothetical protein (NCBI ptt file), at 4,357,940 to 4,359,667 BT3381 BT3382: BT3382 - hypothetical protein (NCBI ptt file), at 4,359,698 to 4,361,446 BT3382 BT3383: BT3383 - hypothetical protein (NCBI ptt file), at 4,361,466 to 4,361,891 BT3383 BT3384: BT3384 - hypothetical protein (NCBI ptt file), at 4,362,121 to 4,362,732 BT3384 BT3385: BT3385 - conserved hypothetical protein (NCBI ptt file), at 4,363,373 to 4,365,463 BT3385
Group Condition BT3381 BT3382 BT3383 BT3384 BT3385
phage SJC12_cps8_0.1MOI -0.4 +0.1 -1.2 -0.6 -0.5
stress Varel_Bryant_medium_Glucose with Thioridazine 0.025 mM -0.3 +0.1 -0.7 -0.1 -0.9
stress BHIS with Chlorpromazine 0.1 mM -0.1 +0.1 -1.4 -0.4 +0.0
carbon source Heparin from porcine intestinal mucosa (C) -0.0 -0.1 -0.8 -0.5 -0.2
stress BHIS with Thioridazine 0.0125 mM -0.2 -0.0 -1.0 -0.1 -0.2
stress Varel_Bryant_medium_Glucose with Sulfamonomethoxine 0.2 mM -0.1 +0.1 -0.8 -0.1 -0.6
carbon source Mannan from Saccharomyces cerevisiae (C) +0.1 +0.1 -0.1 -1.0 -0.6
stress Varel_Bryant_medium_Glucose with Trimethoprim 0.025 mM -0.1 +0.2 -0.6 -0.4 -0.4
stress Varel_Bryant_medium_Glucose with Lincomycin 0.0015625 mM -0.2 +0.2 -0.9 -0.1 -0.3
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_DTT_noNitrogen +0.1 +0.1 -0.6 -0.2 -0.7
mouse_post_colonization Post-colonization (Day 1) - Cage6;Mouse1 +0.1 +0.2 -1.4 +0.2 -0.1
stress Varel_Bryant_medium_Glucose with Sulfaquinoxaline 0.2 mM +0.1 +0.2 -0.9 +0.1 -0.4
stress BHIS with Thioridazine 0.025 mM -0.0 -0.1 -0.7 +0.4 -0.5
survival aerobic shaking 48 hr copy A -0.2 -0.4 -0.8 +0.5 +0.1
carbon source Hyaluronic from Streptococcus equi +0.2 +0.2 -0.4 -0.7 -0.1
stress BHIS with Dimethyl Sulfoxide 9 vol% +0.0 -0.0 +0.6 -0.9 -0.1
stress Varel_Bryant_medium_Glucose with Econazole nitrate salt 0.025 mM -0.4 +0.3 -0.4 +0.3 -0.1
stress Varel_Bryant_medium_Glucose with Ciprofloxacin Hydrochloride 0.025 mM -0.0 +0.3 -0.7 +0.5 +0.1
mouse Post-colonization (Day 7) - Cage1B;Mouse5 -0.2 +0.2 -0.6 +0.4 +0.3
carbon source (+)-Arabinogalactan (C) -0.2 +0.0 +0.6 -0.6 +0.3
stress BHIS with Dimetridazole 0.025 mM -0.3 +0.1 +0.9 +0.1 -0.3
stress Varel_Bryant_medium_Glucose with Deoxycholic 0.075 mg/ml +0.5 +0.3 +0.2 -0.1 -0.5
mouse Post-colonization (Day 7) - Cage1A;Mouse1 -0.2 +0.1 +0.8 +0.0 +0.4
stress BHIS with Fusidic 0.004 mg/ml +0.3 +0.1 +0.5 -0.2 +0.5
mouse_peg_treatment PEG (Day 1 ) - Cage1;Mouse5 -0.2 +0.3 +0.5 +0.4 +0.3
mouse_post_colonization Post-colonization (Day 14) - Cage7;Mouse3 +0.2 -0.0 +0.7 +0.3 +0.5
mouse_peg_treatment PEG (Day 1) - Cage4;Mouse1 -0.2 +0.2 +1.0 +0.1 +0.4
mouse_peg_treatment PEG (Day 2) - Cage4;Mouse1 +0.2 +0.3 +0.3 +0.2 +0.6
stress Varel_Bryant_medium_Glucose with Bile salts 0.5 mg/mL; pH 7 +0.0 +0.2 +0.5 +0.6 +0.4
mouse_peg_treatment PEG (Day 3) - Cage3;Mouse2 +0.3 -0.1 +1.0 +0.5 +0.4
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