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Protein
Homologs
Fitness for 5 genes in
Bacteroides thetaiotaomicron VPI-5482
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
BT3381 and BT3382 are separated by 30 nucleotides
BT3382 and BT3383 are separated by 19 nucleotides
BT3383 and BT3384 are separated by 229 nucleotides
BT3384 and BT3385 are separated by 640 nucleotides
BT3381: BT3381 - hypothetical protein (NCBI ptt file), at 4,357,940 to 4,359,667
BT3381
BT3382: BT3382 - hypothetical protein (NCBI ptt file), at 4,359,698 to 4,361,446
BT3382
BT3383: BT3383 - hypothetical protein (NCBI ptt file), at 4,361,466 to 4,361,891
BT3383
BT3384: BT3384 - hypothetical protein (NCBI ptt file), at 4,362,121 to 4,362,732
BT3384
BT3385: BT3385 - conserved hypothetical protein (NCBI ptt file), at 4,363,373 to 4,365,463
BT3385
Group
Condition
BT3381
BT3382
BT3383
BT3384
BT3385
phage
SJC12_cps8_0.1MOI
-0.4
+0.1
-1.2
-0.6
-0.5
stress
Varel_Bryant_medium_Glucose with Thioridazine 0.025 mM
-0.3
+0.1
-0.7
-0.1
-0.9
stress
BHIS with Chlorpromazine 0.1 mM
-0.1
+0.1
-1.4
-0.4
+0.0
carbon source
Heparin from porcine intestinal mucosa (C)
-0.0
-0.1
-0.8
-0.5
-0.2
stress
BHIS with Thioridazine 0.0125 mM
-0.2
-0.0
-1.0
-0.1
-0.2
stress
Varel_Bryant_medium_Glucose with Sulfamonomethoxine 0.2 mM
-0.1
+0.1
-0.8
-0.1
-0.6
carbon source
Mannan from Saccharomyces cerevisiae (C)
+0.1
+0.1
-0.1
-1.0
-0.6
stress
Varel_Bryant_medium_Glucose with Trimethoprim 0.025 mM
-0.1
+0.2
-0.6
-0.4
-0.4
stress
Varel_Bryant_medium_Glucose with Lincomycin 0.0015625 mM
-0.2
+0.2
-0.9
-0.1
-0.3
nitrogen source
L-Serine (N); Varel_Bryant_medium_Glucose_DTT_noNitrogen
+0.1
+0.1
-0.6
-0.2
-0.7
mouse_post_colonization
Post-colonization (Day 1) - Cage6;Mouse1
+0.1
+0.2
-1.4
+0.2
-0.1
stress
Varel_Bryant_medium_Glucose with Sulfaquinoxaline 0.2 mM
+0.1
+0.2
-0.9
+0.1
-0.4
stress
BHIS with Thioridazine 0.025 mM
-0.0
-0.1
-0.7
+0.4
-0.5
survival
aerobic shaking 48 hr copy A
-0.2
-0.4
-0.8
+0.5
+0.1
carbon source
Hyaluronic from Streptococcus equi
+0.2
+0.2
-0.4
-0.7
-0.1
stress
BHIS with Dimethyl Sulfoxide 9 vol%
+0.0
-0.0
+0.6
-0.9
-0.1
stress
Varel_Bryant_medium_Glucose with Econazole nitrate salt 0.025 mM
-0.4
+0.3
-0.4
+0.3
-0.1
stress
Varel_Bryant_medium_Glucose with Ciprofloxacin Hydrochloride 0.025 mM
-0.0
+0.3
-0.7
+0.5
+0.1
mouse
Post-colonization (Day 7) - Cage1B;Mouse5
-0.2
+0.2
-0.6
+0.4
+0.3
carbon source
(+)-Arabinogalactan (C)
-0.2
+0.0
+0.6
-0.6
+0.3
stress
BHIS with Dimetridazole 0.025 mM
-0.3
+0.1
+0.9
+0.1
-0.3
stress
Varel_Bryant_medium_Glucose with Deoxycholic 0.075 mg/ml
+0.5
+0.3
+0.2
-0.1
-0.5
mouse
Post-colonization (Day 7) - Cage1A;Mouse1
-0.2
+0.1
+0.8
+0.0
+0.4
stress
BHIS with Fusidic 0.004 mg/ml
+0.3
+0.1
+0.5
-0.2
+0.5
mouse_peg_treatment
PEG (Day 1 ) - Cage1;Mouse5
-0.2
+0.3
+0.5
+0.4
+0.3
mouse_post_colonization
Post-colonization (Day 14) - Cage7;Mouse3
+0.2
-0.0
+0.7
+0.3
+0.5
mouse_peg_treatment
PEG (Day 1) - Cage4;Mouse1
-0.2
+0.2
+1.0
+0.1
+0.4
mouse_peg_treatment
PEG (Day 2) - Cage4;Mouse1
+0.2
+0.3
+0.3
+0.2
+0.6
stress
Varel_Bryant_medium_Glucose with Bile salts 0.5 mg/mL; pH 7
+0.0
+0.2
+0.5
+0.6
+0.4
mouse_peg_treatment
PEG (Day 3) - Cage3;Mouse2
+0.3
-0.1
+1.0
+0.5
+0.4
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