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Protein
Homologs
Fitness for 5 genes in
Bacteroides thetaiotaomicron VPI-5482
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
BT3377 and BT3378 are separated by 219 nucleotides
BT3378 and BT3379 overlap by 4 nucleotides
BT3379 and BT3380 are separated by 8 nucleotides
BT3380 and BT3381 are separated by 161 nucleotides
BT3377: BT3377 - putative glycosyltransferase (NCBI ptt file), at 4,353,938 to 4,354,906
BT3377
BT3378: BT3378 - conserved hypothetical protein (NCBI ptt file), at 4,355,126 to 4,355,506
BT3378
BT3379: BT3379 - putative glycosyltransferase (NCBI ptt file), at 4,355,503 to 4,356,438
BT3379
BT3380: BT3380 - putative membrane protein (NCBI ptt file), at 4,356,447 to 4,357,778
BT3380
BT3381: BT3381 - hypothetical protein (NCBI ptt file), at 4,357,940 to 4,359,667
BT3381
Group
Condition
BT3377
BT3378
BT3379
BT3380
BT3381
stress
Varel_Bryant_medium_Glucose with Econazole nitrate salt 0.025 mM
-0.5
-0.3
-0.9
-0.4
-0.4
stress
Varel_Bryant_medium_Glucose with Trimethoprim 0.025 mM
-0.6
-0.4
-0.7
-0.5
-0.1
stress
Varel_Bryant_medium_Glucose with Econazole nitrate salt 0.0125 mM
-0.7
-0.4
-0.5
-0.4
-0.2
stress
Varel_Bryant_medium_Glucose with Chlorpromazine 0.1 mM
-0.1
-0.2
-0.6
-1.0
-0.3
stress
Varel_Bryant_medium_Glucose with Dimethyl Sulfoxide 0.1 vol%
-0.4
-0.2
-0.7
-0.4
-0.4
stress
Varel_Bryant_medium_Glucose with 8-hydroxy-nitroquinoline 0.05 mM
-0.6
-0.8
-0.1
-0.5
-0.1
stress
BHIS with 2-Mercaptopyridine N-oxide 0.2 mM
-0.5
-0.1
-0.9
-0.3
-0.2
stress
BHIS with Ceftriaxone hemi(heptahydrate) 0.1 mM
-0.1
-1.1
-0.4
-0.0
-0.4
stress
BHIS with Sulfamonomethoxine 0.1 mM
-0.4
-0.4
-0.7
-0.3
-0.2
stress
Varel_Bryant_medium_Glucose with Chlorhexidine diacetate salt 0.003125 mM
-0.2
-0.6
-0.6
-0.2
-0.3
carbon source
(+)-Arabinogalactan (C)
+0.3
-0.9
-0.9
-0.1
-0.2
stress
Varel_Bryant_medium_Glucose with Sulfaquinoxaline 0.1 mM
-0.5
-0.2
-0.7
-0.4
+0.1
stress
BHIS with Oxytetracycline 0.000390625 mM
-0.2
-0.7
-0.4
+0.2
-0.4
stress
BHIS with 5-Fluorouracil 0.1 mM
-0.5
+0.4
-0.5
-0.5
-0.2
stress
Varel_Bryant_medium_Glucose with Dimetridazole 0.025 mM
-0.5
+0.5
-0.3
-0.5
-0.1
stress
BHIS with Chlorpromazine 0.2 mM
-0.5
+0.9
-0.8
-0.1
+0.0
stress
BHIS with Chlorpromazine 0.1 mM
-0.4
+1.0
-0.3
-0.3
-0.1
mouse_peg_treatment
PEG (Day 2) - Cage3;Mouse3
+0.6
-0.9
+0.5
+0.0
-0.1
stress
BHIS with Doxycycline hyclate 0.0001953125 mM
+0.1
+1.1
-0.5
-0.1
-0.0
nitrogen source
L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen
+0.2
+1.6
-0.6
-0.6
+0.1
mouse_peg_treatment
PEG (Day 1) - Cage3;Mouse1
+0.4
-0.9
+0.8
+0.4
+0.3
stress
Bile salts 0.5 mg/ml
-0.5
+0.5
+0.4
+0.4
+0.2
mouse_post_colonization
Post-colonization (Day 14) - Cage1;Mouse3
+0.8
-0.5
+0.7
+0.3
-0.1
mouse_post_colonization
Post-colonization (Day 12) - Cage3;Mouse4
+0.8
+0.1
+0.9
+0.2
-0.2
mouse_recovery_after_peg
Post-colonization (Day 14) - Cage4;Mouse2
+0.7
-0.0
+1.0
+0.2
-0.1
mouse_peg_treatment
PEG (Day 2) - Cage4;Mouse1
+0.8
-0.4
+0.9
+0.4
+0.2
mouse_post_colonization
Post-colonization (Day 14) - Cage7;Mouse3
+0.5
+0.2
+0.8
+0.4
+0.2
mouse_post_colonization
Post-colonization (Day 12) - Cage5;Mouse3
+0.6
+0.4
+0.6
+0.4
+0.2
mouse_post_colonization
Post-colonization (Day 12) - Cage7;Mouse1
+0.6
+0.6
+0.8
+0.3
-0.1
mouse_peg_treatment
PEG (Day 1) - Cage4;Mouse1
+0.7
+0.5
+1.0
+0.1
-0.2
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