Fitness for 5 genes in Bacteroides thetaiotaomicron VPI-5482

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500 ntBT3365 and BT3366 are separated by 162 nucleotidesBT3366 and BT3367 are separated by 79 nucleotidesBT3367 and BT3368 are separated by 103 nucleotidesBT3368 and BT3369 are separated by 4 nucleotides BT3365: BT3365 - putative glycosyltransferase (NCBI ptt file), at 4,339,755 to 4,341,794 BT3365 BT3366: BT3366 - putative glycosyltransferase yibD (NCBI ptt file), at 4,341,957 to 4,342,967 BT3366 BT3367: BT3367 - putative glycosyltransferase (NCBI ptt file), at 4,343,047 to 4,344,210 BT3367 BT3368: BT3368 - putative glycosyltransferase (NCBI ptt file), at 4,344,314 to 4,345,477 BT3368 BT3369: BT3369 - putative glycosyltransferase (NCBI ptt file), at 4,345,482 to 4,346,723 BT3369
Group Condition BT3365 BT3366 BT3367 BT3368 BT3369
carbon source D-Glucose (C) N.D. N.D. N.D. -4.2 -1.5
carbon source L-Rhamnose (C) N.D. N.D. N.D. -3.1 -1.8
carbon source Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (~7.5 mM 3-keto-trehalose) 0.5x (C) N.D. N.D. N.D. -2.0 -2.3
carbon source L-Fucose (C) N.D. N.D. N.D. -2.7 -1.6
stress Varel_Bryant_medium_Glucose with Ethanol 3.33 vol% N.D. N.D. N.D. -1.8 -2.4
carbon source D-Glucose 20mM (C) N.D. N.D. N.D. -2.3 -1.9
stress Varel_Bryant_medium_Glucose with Chenodeoxycholic 0.125 mg/ml N.D. N.D. N.D. -2.0 -2.1
carbon source D-Ribose (C) N.D. N.D. N.D. -2.4 -1.7
carbon source D-Glucose (C) N.D. N.D. N.D. -3.0 -1.0
carbon source L-Fucose (C) N.D. N.D. N.D. -2.6 -1.3
stress Varel_Bryant_medium_Glucose with Deoxycholic 0.075 mg/ml N.D. N.D. N.D. -2.1 -1.7
stress Varel_Bryant_medium_Glucose with Bile salts 0.25 mg/mL; pH 6 N.D. N.D. N.D. -2.2 -1.6
carbon source D-Xylose (C) N.D. N.D. N.D. -1.2 -2.4
carbon source D-Galacturonic Acid (C) N.D. N.D. N.D. -1.3 -2.2
carbon source Maltitol 20mM (C) N.D. N.D. N.D. -2.2 -1.4
carbon source D-Mannose (C) N.D. N.D. N.D. -1.1 -2.5
stress Varel_Bryant_medium_Glucose with Bile salts 0.25 mg/mL; pH 7 N.D. N.D. N.D. -1.5 -2.0
carbon source D-Glucose (C) N.D. N.D. N.D. -1.8 -1.7
carbon source Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (~7.5 mM 3-keto-trehalose) 0.5x (C) N.D. N.D. N.D. -2.1 -1.4
mouse_post_colonization Post-colonization (Day 6) - Cage4;Mouse4 N.D. N.D. N.D. -2.2 -1.2
carbon source D-Arabinose (C) N.D. N.D. N.D. -1.7 -1.7
carbon source D-Galactose (C) N.D. N.D. N.D. -1.7 -1.6
stress Varel_Bryant_medium_Glucose with Chenodeoxycholic 0.25 mg/ml N.D. N.D. N.D. -1.2 -2.2
stress Varel_Bryant_medium_Glucose with Deoxycholic 0.2 mg/ml N.D. N.D. N.D. -1.2 -2.1
mouse Post-colonization (Day 4) - Cage1C;Mouse1 N.D. N.D. N.D. -1.6 -1.8
carbon source Lactulose 20mM (C) N.D. N.D. N.D. -2.4 -0.8
stress Varel_Bryant_medium_Glucose with Deoxycholic 0.2 mg/ml N.D. N.D. N.D. -1.7 -1.5
stress Varel_Bryant_medium_Glucose with 8-hydroxy-nitroquinoline 0.05 mM N.D. N.D. N.D. -2.3 -0.8
pH Varel_Bryant_medium_Glucose; pH 6 N.D. N.D. N.D. -1.1 -2.0
stress BHIS with Ceftazidime 0.5 mg/ml N.D. N.D. N.D. +1.1 -2.3
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