Fitness for 5 genes in Bacteroides thetaiotaomicron VPI-5482

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500 ntBT3338 and BT3339 are separated by 16 nucleotidesBT3339 and BT3340 are separated by 179 nucleotidesBT3340 and BT3341 are separated by 150 nucleotidesBT3341 and BT3342 are separated by 40 nucleotides BT3338: BT3338 - RND efflux system for fusidic acid, chlorpromazine, and thioridazine, inner membrane component (from data), at 4,296,721 to 4,299,936 BT3338 BT3339: BT3339 - RND efflux system for fusidic acid, chlorpromazine, and thioridazine, membrane fusion component (from data), at 4,299,953 to 4,301,128 BT3339 BT3340: BT3340 - Beta-galactosidase (EC 3.2.1.23) (from data), at 4,301,308 to 4,304,418 BT3340 BT3341: BT3341 - conserved hypothetical protein (NCBI ptt file), at 4,304,569 to 4,306,497 BT3341 BT3342: BT3342 - hypothetical protein (NCBI ptt file), at 4,306,538 to 4,307,317 BT3342
Group Condition BT3338 BT3339 BT3340 BT3341 BT3342
stress BHIS with Fusidic 0.004 mg/ml -3.5 -3.6 +0.4 N.D. -1.3
stress BHIS with Fusidic 0.004 mg/ml -3.0 -3.6 +0.1 N.D. -1.2
mouse_post_colonization Post-colonization (Day 10) - Cage4;Mouse5 -1.9 -1.9 -0.2 N.D. -2.1
mouse_post_colonization Post-colonization (Day 10) - Cage5;Mouse5 -2.1 -1.5 -0.3 N.D. -2.1
stress BHIS with Simvastatin 30 uM -3.0 -2.9 +0.1 N.D. -0.3
mouse_peg_treatment PEG (Day 2) - Cage3;Mouse3 -1.5 -1.8 -0.3 N.D. -2.4
stress BHIS with DAMPA 60 uM -2.8 -2.6 -0.1 N.D. -0.4
stress BHIS with DAMPA 60 uM -3.0 -2.7 +0.1 N.D. -0.2
mouse_post_colonization Post-colonization (Day 10) - Cage4;Mouse1 -1.7 -1.8 -0.2 N.D. -2.2
mouse_post_colonization Post-colonization (Day 12) - Cage4;Mouse1 -2.1 -1.6 -0.2 N.D. -1.9
mouse_post_colonization Post-colonization (Day 10) - Cage2;Mouse1 -1.4 -1.2 -0.2 N.D. -3.0
mouse_peg_treatment PEG (Day 1) - Cage2;Mouse1 -1.9 -1.3 -0.3 N.D. -2.2
mouse_post_colonization Post-colonization (Day 12) - Cage2;Mouse1 -1.7 -1.0 -0.1 N.D. -2.7
stress BHIS with Simvastatin 30 uM -2.7 -1.9 -0.0 N.D. -0.8
stress BHIS with Fusidic 0.002 mg/ml -1.8 -2.1 +0.1 N.D. -1.6
mouse_peg_treatment PEG (Day 1) - Cage3;Mouse1 -1.7 -1.6 -0.3 N.D. -1.8
mouse_post_colonization Post-colonization (Day 12) - Cage7;Mouse3 -1.8 -1.7 -0.0 N.D. -1.8
mouse_post_colonization Post-colonization (Day 10) - Cage3;Mouse1 -1.5 -1.5 -0.0 N.D. -2.3
mouse_post_colonization Post-colonization (Day 14) - Cage3;Mouse1 -1.8 -1.4 -0.1 N.D. -1.8
stress BHIS with Simvastatin 30 uM -2.8 -2.0 +0.1 N.D. -0.4
stress BHIS with DAMPA 60 uM -2.7 -2.4 +0.1 N.D. -0.1
stress BHIS with Fusidic 0.002 mg/ml -1.6 -1.8 +0.1 N.D. -1.7
mouse_post_colonization Post-colonization (Day 8) - Cage7;Mouse2 -1.8 -1.5 -0.1 N.D. -1.6
mouse_peg_treatment PEG (Day 1) - Cage3;Mouse4 -1.8 -1.2 -0.3 N.D. -1.7
mouse_post_colonization Post-colonization (Day 8) - Cage6;Mouse2 -1.3 -1.5 -0.2 N.D. -1.9
mouse_post_colonization Post-colonization (Day 14) - Cage7;Mouse3 -1.7 -1.7 -0.1 N.D. -1.4
mouse_post_colonization Post-colonization (Day 12) - Cage4;Mouse5 -1.5 -1.3 -0.2 N.D. -1.9
mouse_post_colonization Post-colonization (Day 14) - Cage1;Mouse1 -1.6 -1.2 -0.0 N.D. -2.0
mouse_post_colonization Post-colonization (Day 12) - Cage1;Mouse3 -1.4 -1.2 -0.1 N.D. -2.1
mouse_peg_treatment PEG (Day 1) - Cage4;Mouse1 -1.8 -1.5 +0.2 N.D. -1.3
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