Fitness for 5 genes in Bacteroides thetaiotaomicron VPI-5482

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500 ntBT3315 and BT3316 are separated by 11 nucleotidesBT3316 and BT3317 are separated by 507 nucleotidesBT3317 and BT3318 are separated by 42 nucleotidesBT3318 and BT3319 are separated by 42 nucleotides BT3315: BT3315 - hypothetical protein (NCBI ptt file), at 4,259,251 to 4,259,442 BT3315 BT3316: BT3316 - hypothetical protein (NCBI ptt file), at 4,259,454 to 4,259,906 BT3316 BT3317: BT3317 - conserved hypothetical protein (NCBI ptt file), at 4,260,414 to 4,261,043 BT3317 BT3318: BT3318 - signal peptidase I (NCBI ptt file), at 4,261,086 to 4,262,024 BT3318 BT3319: BT3319 - signal peptidase I (NCBI ptt file), at 4,262,067 to 4,263,548 BT3319
Group Condition BT3315 BT3316 BT3317 BT3318 BT3319
phage DAC23_cps8_10MOI -0.7 -0.4 -0.9 -1.3 N.D.
phage DAC15 _cps3_0.1MOI -0.6 +0.0 -1.0 -1.5 N.D.
phage SJC15_cps8_1MOI -0.4 -0.3 -0.4 -1.5 N.D.
carbon source Chondroitin sulfate A from bovine trachea (C) +0.3 -0.1 -2.0 -0.6 N.D.
stress BHIS with Doxycycline hyclate 0.0001953125 mM -0.9 +0.4 -1.0 -0.6 N.D.
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_DTT_noNitrogen -0.7 -0.6 +0.6 -1.1 N.D.
mouse_post_colonization Post-colonization (Day 1) - Cage6;Mouse1 -1.0 -0.5 -0.5 +0.8 N.D.
stress Varel_Bryant_medium_Glucose with Chlorpromazine 0.1 mM -1.3 +0.4 +0.6 -0.9 N.D.
stress BHIS with Simvastatin 30 uM +0.1 +0.8 -1.4 -0.5 N.D.
carbon source D-Ribose (C) -0.9 +0.6 +0.3 -0.8 N.D.
stress Varel_Bryant_medium_Glucose with Trimethoprim 0.0125 mM -0.7 +0.7 +0.3 -1.0 N.D.
stress BHIS with Dimethyl Sulfoxide 10 vol% +0.9 +0.3 -0.8 -0.8 N.D.
stress BHIS with Dimethyl Sulfoxide 9 vol% +1.2 -0.1 -1.1 -0.3 N.D.
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen -0.4 +0.7 +0.7 -1.1 N.D.
carbon source Heparin from porcine intestinal mucosa (C) -1.9 +0.6 +1.0 +0.3 N.D.
stress Varel_Bryant_medium_Glucose with Thioridazine 0.025 mM -1.1 +1.0 +1.2 -0.5 N.D.
carbon source Heparin from porcine intestinal mucosa (C) -1.7 +1.1 +1.0 +0.4 N.D.
mouse_post_colonization Post-colonization (Day 1) - Cage3;Mouse1 -0.8 +0.5 +0.7 +0.7 N.D.
stress BHIS with Thioridazine 0.0125 mM -0.8 -0.3 +1.4 +0.9 N.D.
stress BHIS with Paraquat dichloride 0.1 mg/ml -1.7 +0.2 +1.6 +1.1 N.D.
stress BHIS with Benzethonium chloride 0.002 mM -1.4 +0.3 +1.3 +1.2 N.D.
stress BHIS with Trimethoprim 0.0125 mM -0.6 +0.7 +1.4 +0.0 N.D.
stress BHIS with Benzethonium chloride 0.002 mM -1.2 -0.1 +1.7 +1.3 N.D.
stress BHIS with Thioridazine 0.0125 mM -0.6 +0.0 +1.9 +0.9 N.D.
stress Varel_Bryant medium with Chlorhexidine diacetate salt 0.0015 mM -0.3 -0.1 +1.7 +0.9 N.D.
stress BHIS with Thioridazine 0.0125 mM +0.5 -0.0 +2.2 +0.5 N.D.
stress BHIS with Paraquat dichloride 0.1 mg/ml -1.3 +0.4 +2.5 +1.8 N.D.
stress BHIS with Chlorpromazine 0.1 mM -0.4 +0.5 +2.9 +2.0 N.D.
stress BHIS with Chlorpromazine 0.2 mM -0.1 +0.3 +2.9 +2.1 N.D.
stress BHIS with Thioridazine 0.025 mM -0.6 +0.4 +3.9 +2.7 N.D.
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