Fitness for 5 genes in Bacteroides thetaiotaomicron VPI-5482

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500 ntBT3113 and BT3114 are separated by 253 nucleotidesBT3114 and BT3115 are separated by 445 nucleotidesBT3115 and BT3116 are separated by 777 nucleotidesBT3116 and BT3117 are separated by 11 nucleotides BT3113: BT3113 - putative transmembrane efflux protein (NCBI ptt file), at 3,961,873 to 3,963,015 BT3113 BT3114: BT3114 - beta-galactosidase (NCBI ptt file), at 3,963,269 to 3,966,670 BT3114 BT3115: BT3115 - putative proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydraogenase (NCBI ptt file), at 3,967,116 to 3,970,436 BT3115 BT3116: BT3116 - GTP-binding protein (NCBI ptt file), at 3,971,214 to 3,972,317 BT3116 BT3117: BT3117 - putative oxidoreductase (NCBI ptt file), at 3,972,329 to 3,973,240 BT3117
Group Condition BT3113 BT3114 BT3115 BT3116 BT3117
stress Varel_Bryant_medium_Glucose with Econazole nitrate salt 0.025 mM -0.2 +0.1 +0.0 N.D. -2.4
stress Varel_Bryant_medium_Glucose with Chlorpromazine 0.1 mM -0.1 -0.3 +0.2 N.D. -1.8
stress Varel_Bryant_medium_Glucose with Deoxycholic 0.075 mg/ml -0.1 -0.2 -0.2 N.D. -1.6
stress BHIS with Vancomycin 0.016 mg/ml -0.4 -0.1 -0.2 N.D. -1.0
stress Varel_Bryant_medium_Glucose with Econazole nitrate salt 0.0125 mM -0.2 -0.0 -0.1 N.D. -1.4
carbon source Heparin from porcine intestinal mucosa (C) -0.5 -0.4 +0.1 N.D. -0.7
mouse_peg_treatment PEG (Day 1) - Cage3;Mouse4 -0.7 -0.1 +0.1 N.D. -0.9
mouse_post_colonization Post-colonization (Day 14) - Cage2;Mouse2 -0.4 -0.0 -0.1 N.D. -1.0
stress Varel_Bryant_medium_Glucose with Chenodeoxycholic 0.5 mg/ml -0.3 -0.3 -0.2 N.D. -0.7
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen +0.0 +0.2 -0.0 N.D. -1.7
carbon source Heparin from porcine intestinal mucosa (C) -0.4 -0.4 +0.1 N.D. -0.7
stress Varel_Bryant_medium_Glucose with Thioridazine 0.025 mM -0.2 -0.2 +0.1 N.D. -1.0
stress BHIS with Oxytetracycline 0.00078125 mM -0.0 +0.1 -0.1 N.D. -1.3
stress Varel_Bryant_medium_Glucose with Sulfaquinoxaline 0.1 mM -0.2 -0.1 +0.2 N.D. -1.2
stress Varel_Bryant_medium_Glucose with Geneticin G418 0.2 mM -0.3 +0.1 +0.0 N.D. -1.2
carbon source L-Arabinose (C) -0.1 +0.1 -0.0 N.D. -1.3
stress Varel_Bryant medium with Dibucaine 0.2 mM -0.2 +0.1 +0.1 N.D. -1.1
phage DAC23_cps8_10MOI -0.4 -0.3 +0.2 N.D. -0.6
stress Varel_Bryant_medium_Glucose with Doxycycline hyclate 0.0001953125 mM -0.4 +0.0 +0.2 N.D. -1.0
stress BHIS with Doxycycline hyclate 0.0001953125 mM +0.3 -0.1 +0.0 N.D. -1.3
stress BHIS with Sulfamonomethoxine 0.1 mM -0.3 -0.2 +0.2 N.D. -0.9
stress Varel_Bryant_medium_Glucose with Cephalothin 0.1 mM -0.1 +0.2 +0.2 N.D. -1.1
carbon source D-Glucosamine Hydrochloride (C) +0.3 +0.2 -0.2 N.D. -1.0
stress BHIS with Simvastatin 30 uM +0.5 -0.4 -0.4 N.D. -0.3
stress BHIS with 5-Fluorouracil 0.2 mM -0.4 -0.3 +0.4 N.D. +0.6
stress BHIS with Chlorpromazine 0.1 mM -0.5 -0.1 +0.1 N.D. +1.0
phage SJC12_cps8_0.1MOI -0.4 -0.1 +0.0 N.D. +1.0
phage HNL05_cps7_0.1MOI -0.2 -0.1 -0.2 N.D. +1.2
phage DAC16_cps7_0.1MOI -0.3 -0.1 +0.1 N.D. +1.2
phage DAC19_cps8_0.1MOI -0.1 -0.1 +0.2 N.D. +1.1
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