Fitness for 5 genes in Bacteroides thetaiotaomicron VPI-5482

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500 ntBT3048 and BT3049 are separated by 184 nucleotidesBT3049 and BT3050 overlap by 32 nucleotidesBT3050 and BT3051 are separated by 324 nucleotidesBT3051 and BT3052 are separated by 675 nucleotides BT3048: BT3048 - hypothetical protein (NCBI ptt file), at 3,861,603 to 3,864,290 BT3048 BT3049: BT3049 - two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file), at 3,864,475 to 3,868,605 BT3049 BT3050: BT3050 - chitinase precursor (NCBI ptt file), at 3,868,574 to 3,869,539 BT3050 BT3051: BT3051 - mucin-desulfating sulfatase (NCBI ptt file), at 3,869,864 to 3,871,420 BT3051 BT3052: BT3052 - transcriptional regulator (NCBI ptt file), at 3,872,096 to 3,873,046 BT3052
Group Condition BT3048 BT3049 BT3050 BT3051 BT3052
mouse_post_colonization Post-colonization (Day 8) - Cage6;Mouse2 -0.2 +0.6 -0.4 -0.2 -0.4
mouse_post_colonization Post-colonization (Day 12) - Cage1;Mouse3 -0.1 +0.6 -0.2 -0.2 -0.6
stress BHIS with Simvastatin 30 uM -0.1 +0.1 +0.5 -0.3 -0.7
mouse_post_colonization Post-colonization (Day 8) - Cage7;Mouse2 -0.1 +0.6 +0.0 -0.3 -0.6
mouse_post_colonization Post-colonization (Day 6) - Cage5;Mouse5 +0.1 +0.5 +0.0 -0.2 -0.7
mouse_post_colonization Post-colonization (Day 6) - Cage6;Mouse2 -0.3 +0.5 -0.4 +0.2 -0.3
carbon source D-Trehalose 20mM (C) -0.1 -0.0 +0.7 -0.1 -0.6
mouse_post_colonization Post-colonization (Day 12) - Cage5;Mouse2 -0.1 +0.6 +0.2 -0.3 -0.5
mouse_peg_treatment PEG (Day 1) - Cage4;Mouse1 -0.1 +0.9 +0.2 -0.1 -0.7
mouse_post_colonization Post-colonization (Day 12) - Cage7;Mouse1 -0.2 +0.7 +0.5 -0.0 -0.9
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen +0.2 +0.1 +0.5 +0.1 -0.6
mouse_post_colonization Post-colonization (Day 12) - Cage4;Mouse1 -0.2 +0.8 +0.2 +0.0 -0.5
mouse_post_colonization Post-colonization (Day 10) - Cage5;Mouse5 -0.1 +0.9 -0.2 +0.1 -0.3
mouse_peg_treatment PEG (Day 1) - Cage3;Mouse1 +0.0 +0.9 +0.2 +0.1 -0.8
mouse_post_colonization Post-colonization (Day 14) - Cage3;Mouse1 -0.0 +0.8 +0.3 +0.2 -0.7
mouse_post_colonization Post-colonization (Day 10) - Cage4;Mouse1 +0.1 +0.8 +0.3 -0.1 -0.4
mouse_post_colonization Post-colonization (Day 10) - Cage4;Mouse5 -0.0 +0.7 +0.2 +0.1 -0.4
mouse_peg_treatment PEG (Day 2) - Cage4;Mouse1 -0.2 +0.9 +0.2 +0.2 -0.4
mouse Post-dosage t1 (Day 1) - Cage1C;Mouse1 +0.0 +0.3 -0.4 +0.1 +0.8
stress BHIS with Simvastatin 30 uM -0.2 +0.1 +0.7 +0.5 -0.1
stress Varel_Bryant_medium_Glucose with Econazole nitrate salt 0.025 mM -0.1 +0.3 +0.3 -0.1 +0.8
mouse_post_colonization Post-colonization (Day 14) - Cage4;Mouse4 -0.2 +0.9 +0.2 +0.1 +0.2
carbon source D-Ribose (C) -0.1 -0.1 +0.1 +0.5 +1.0
stress Bile salts 0.5 mg/ml -0.0 -0.2 +0.3 +0.3 +0.9
stress BHIS with Chlorpromazine 0.1 mM +0.1 -0.1 +0.6 +0.7 +0.3
stress Varel_Bryant_medium_Glucose with Bile salts 0.5 mg/mL; pH 7 -0.0 -0.2 +0.3 +0.5 +1.1
mouse_peg_treatment PEG (Day 3) - Cage2;Mouse1 -0.3 +0.6 +0.3 +0.3 +0.8
mouse_peg_treatment PEG (Day 2) - Cage5;Mouse1 +0.0 +0.7 +0.5 +0.4 +0.2
mouse_post_colonization Post-colonization (Day 12) - Cage7;Mouse3 -0.0 +0.7 +0.3 +0.2 +0.8
mouse_peg_treatment PEG (Day 1 ) - Cage1;Mouse5 +0.0 +0.6 +0.4 +0.4 +0.9
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