Fitness for 5 genes in Bacteroides thetaiotaomicron VPI-5482

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BT3039	BT3040	BT3041	BT3042	BT3043
mouse_post_colonization	Post-colonization (Day 14) - Cage3;Mouse3	-0.4	+0.1	+0.2	-0.5	-2.8
mouse_peg_treatment	PEG (Day 1) - Cage3;Mouse4	-0.7	+0.1	+0.1	-0.6	-2.3
mouse_post_colonization	Post-colonization (Day 12) - Cage2;Mouse1	-0.2	-0.1	+0.1	-0.5	-2.3
mouse_post_colonization	Post-colonization (Day 14) - Cage2;Mouse2	-1.0	+0.3	-0.5	+0.0	-1.8
mouse_peg_treatment	PEG (Day 2) - Cage3;Mouse3	-0.3	-0.0	-0.1	-0.6	-1.8
mouse_post_colonization	Post-colonization (Day 14) - Cage3;Mouse1	-0.5	+0.2	-0.5	-0.5	-1.6
mouse_post_colonization	Post-colonization (Day 8) - Cage6;Mouse1	-0.7	-0.0	+0.2	-0.4	-1.9
mouse_post_colonization	Post-colonization (Day 10) - Cage2;Mouse1	-0.5	+0.1	+0.3	-0.7	-1.9
mouse_post_colonization	Post-colonization (Day 10) - Cage3;Mouse1	-0.3	+0.1	-0.1	-0.2	-2.2
mouse_post_colonization	Post-colonization (Day 6) - Cage5;Mouse5	-0.1	+0.1	-0.1	-0.7	-1.7
mouse_post_colonization	Post-colonization (Day 14) - Cage1;Mouse3	-0.6	+0.2	+0.1	-0.5	-1.6
mouse_post_colonization	Post-colonization (Day 10) - Cage6;Mouse2	-0.2	+0.5	+0.2	-1.1	-1.8
mouse_post_colonization	Post-colonization (Day 8) - Cage3;Mouse1	-0.2	+0.2	+0.2	-0.5	-2.1
mouse_peg_treatment	PEG (Day 1) - Cage3;Mouse1	-0.4	+0.2	-0.4	-0.3	-1.5
mouse_post_colonization	Post-colonization (Day 10) - Cage3;Mouse4	-0.4	+0.2	+0.5	-0.4	-2.2
mouse_post_colonization	Post-colonization (Day 8) - Cage5;Mouse4	-0.5	+0.1	+0.3	-0.3	-1.7
mouse_peg_treatment	PEG (Day 3) - Cage3;Mouse2	-0.4	-0.5	+0.1	+0.7	-2.1
mouse_post_colonization	Post-colonization (Day 8) - Cage4;Mouse5	-0.1	+0.0	+0.3	-0.6	-1.8
mouse_post_colonization	Post-colonization (Day 12) - Cage3;Mouse3	-0.5	+0.0	+0.2	+0.3	-2.2
mouse_post_colonization	Post-colonization (Day 8) - Cage6;Mouse2	-0.1	+0.0	-0.5	+0.6	-2.1
mouse_post_colonization	Post-colonization (Day 6) - Cage6;Mouse2	+0.4	+0.2	+0.3	-0.4	-1.6
mouse	Post-colonization (Day 7) - Cage1A;Mouse1	-0.6	+0.1	+0.1	+1.1	-1.0
carbon source	B-glucan from yeast; autoclaved 2.5 mg/ml (C)	-0.5	-0.4	-0.2	+1.8	+0.1
mouse_coculture	cage1; mouse2; day5; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003	+0.5	-0.1	+0.3	+1.2	-0.9
mouse_coculture	cage1; mouse1; day5; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003	+0.6	-0.3	+0.4	+1.8	-1.0
mouse_post_colonization	Post-colonization (Day 3) - Cage2;Mouse2	-0.5	+0.1	+0.4	+0.3	+1.6
stress	BHIS with Trimethoprim 0.00625 mM	+1.1	-0.2	+1.3	+0.1	+0.4
stress	BHIS with 5-Fluorouracil 0.1 mM	+0.7	-0.0	+1.3	+0.3	+0.5
stress	BHIS with 5-Fluorouracil 0.2 mM	+0.7	+0.2	+1.0	+0.3	+0.6
stress	BHIS with Thioridazine 0.0125 mM	+1.1	-0.1	+1.1	+1.1	+0.5