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Protein
Homologs
Fitness for 5 genes in
Bacteroides thetaiotaomicron VPI-5482
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
BT2999 and BT3000 are separated by 173 nucleotides
BT3000 and BT3001 are separated by 116 nucleotides
BT3001 and BT3002 are separated by 219 nucleotides
BT3002 and BT3003 are separated by 104 nucleotides
BT2999: BT2999 - helicase IV (NCBI ptt file), at 3,778,947 to 3,781,559
BT2999
BT3000: BT3000 - conserved hypothetical protein (NCBI ptt file), at 3,781,733 to 3,782,362
BT3000
BT3001: BT3001 - ATP-dependent DNA helicase (NCBI ptt file), at 3,782,479 to 3,784,062
BT3001
BT3002: BT3002 - hypothetical protein (NCBI ptt file), at 3,784,282 to 3,784,485
BT3002
BT3003: BT3003 - hypothetical protein (NCBI ptt file), at 3,784,590 to 3,786,869
BT3003
Group
Condition
BT2999
BT3000
BT3001
BT3002
BT3003
stress
BHIS with Oxytetracycline 0.000390625 mM
-0.0
-0.4
-2.6
-0.5
-0.1
stress
BHIS with Anhydrotetracycline 0.0125 mM
-0.0
+0.2
-2.0
-1.0
-0.1
stress
BHIS with Doxycycline hyclate 0.000390625 mM
+0.3
-0.5
-2.0
-0.8
+0.4
stress
BHIS with Doxycycline hyclate 0.00009765625 mM
-0.1
+0.2
-0.9
-0.7
-0.0
stress
Varel_Bryant_medium_Glucose with Sulfamethizole 0.2 mM
-0.2
+0.0
+0.0
-1.4
+0.1
nitrogen source
L-Asparagine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen
-0.2
-0.0
-0.3
-1.0
+0.1
stress
BHIS with Irgasan 0.025 mM
-0.0
-0.6
+0.1
-0.9
+0.0
stress
BHIS with Oxytetracycline 0.0001953125 mM
+0.0
+0.1
-0.5
-1.0
+0.0
stress
Varel_Bryant_medium_Glucose with Doxycycline hyclate 0.0001953125 mM
-0.0
+0.2
-0.5
-0.8
+0.0
stress
Varel_Bryant_medium_Glucose with Zinc Pyrithione 0.05 mM
+0.1
+0.2
-0.3
-1.2
+0.2
stress
Varel_Bryant_medium_Glucose with Doxycycline hyclate 0.0001953125 mM
-0.0
+0.1
-0.5
-0.8
+0.2
stress
BHIS with Irgasan 0.0125 mM
+0.3
+0.1
+0.2
-1.0
-0.1
stress
BHIS with Dimethyl Sulfoxide 9 vol%
-0.2
-0.4
-0.1
+0.8
-0.2
stress
BHIS with Sulfamonomethoxine 0.2 mM
+0.1
+0.7
-0.0
-0.9
+0.1
stress
BHIS with Dimethyl Sulfoxide 10 vol%
-0.2
-0.3
-0.1
+0.9
-0.1
mouse_post_colonization
Post-colonization (Day 8) - Cage6;Mouse2
-0.2
-0.4
+0.3
+0.5
-0.2
stress
BHIS with Cephalothin 0.1 mM
+0.1
+0.4
+0.3
-0.7
+0.1
stress
BHIS with Ciprofloxacin Hydrochloride 0.025 mM
+0.2
+0.4
+0.2
-0.6
+0.1
nitrogen source
L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen
-0.2
+1.0
-0.4
-0.0
+0.3
stress
BHIS with Trimethoprim 0.0125 mM
+0.2
+0.8
+0.1
-0.7
+0.2
mouse_post_colonization
Post-colonization (Day 14) - Cage7;Mouse3
+0.2
-0.5
+0.4
+0.7
-0.1
stress
BHIS with 5-Fluorouracil 0.1 mM
+0.2
+0.7
+0.1
-0.6
+0.3
carbon source
L-Rhamnose (C)
-0.1
+0.8
+0.3
-0.3
+0.2
stress
BHIS with Chlorpromazine 0.2 mM
+0.2
+0.9
+0.2
-0.7
+0.3
stress
BHIS with Trimethoprim 0.00625 mM
+0.2
+0.9
+0.1
-0.5
+0.3
stress
Bile salts 0.5 mg/ml
+0.1
+0.2
+0.1
+0.8
+0.4
stress
BHIS with Chlorpromazine 0.1 mM
+0.3
+0.7
+0.5
+0.4
+0.1
stress
BHIS with 5-Fluorouracil 0.1 mM
+0.4
+0.9
+0.5
+0.3
+0.2
stress
Varel_Bryant_medium_Glucose with Chlorpromazine 0.1 mM
-0.1
+0.8
-0.1
+1.3
+0.4
stress
BHIS with Doxycycline hyclate 0.0001953125 mM
+0.5
+0.5
-0.1
+2.8
+1.6
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