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Fitness for 5 genes in
Bacteroides thetaiotaomicron VPI-5482
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
BT2920 and BT2921 are separated by 17 nucleotides
BT2921 and BT2922 are separated by 31 nucleotides
BT2922 and BT2923 are separated by 310 nucleotides
BT2923 and BT2924 are separated by 99 nucleotides
BT2920: BT2920 - putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file), at 3,662,793 to 3,665,987
BT2920
BT2921: BT2921 - conserved hypothetical protein (NCBI ptt file), at 3,666,005 to 3,667,087
BT2921
BT2922: BT2922 - beta-galactosidase (NCBI ptt file), at 3,667,119 to 3,668,933
BT2922
BT2923: BT2923 - two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file), at 3,669,244 to 3,673,260
BT2923
BT2924: BT2924 - acetyl-CoA synthetase (NCBI ptt file), at 3,673,360 to 3,675,420
BT2924
Group
Condition
BT2920
BT2921
BT2922
BT2923
BT2924
mouse_peg_treatment
PEG (Day 2) - Cage4;Mouse1
-0.7
-0.9
-1.0
+0.1
-0.1
mouse_post_colonization
Post-colonization (Day 14) - Cage1;Mouse3
-0.3
-0.3
-1.0
+0.0
-0.4
mouse_recovery_after_peg
Post-colonization (Day 14) - Cage4;Mouse2
-0.5
-0.6
-0.6
-0.0
-0.2
mouse_post_colonization
Post-colonization (Day 12) - Cage4;Mouse1
-0.5
-0.6
-0.6
-0.1
-0.2
mouse_peg_treatment
PEG (Day 3) - Cage2;Mouse1
-0.4
-0.4
-0.8
+0.1
-0.3
mouse
Post-colonization (Day 7) - Cage1A;Mouse1
-0.5
-0.5
-0.5
-0.0
-0.3
mouse_post_colonization
Post-colonization (Day 14) - Cage5;Mouse1
-0.5
-0.6
-0.5
+0.0
-0.2
mouse_post_colonization
Post-colonization (Day 14) - Cage7;Mouse3
-0.3
-0.8
-0.4
-0.0
-0.2
mouse_peg_treatment
PEG (Day 2) - Cage5;Mouse1
-0.3
-0.7
-0.7
+0.1
-0.1
mouse_post_colonization
Post-colonization (Day 10) - Cage1;Mouse4
-0.3
-0.6
-0.5
-0.1
-0.2
mouse_peg_treatment
PEG (Day 1) - Cage4;Mouse1
-0.5
-0.4
-0.8
-0.1
+0.0
mouse_post_colonization
Post-colonization (Day 12) - Cage7;Mouse1
-0.4
-0.2
-0.8
+0.1
-0.4
mouse_post_colonization
Post-colonization (Day 12) - Cage4;Mouse5
-0.2
-0.8
-0.4
-0.2
-0.2
mouse_post_colonization
Post-colonization (Day 12) - Cage5;Mouse3
-0.3
-0.4
-0.6
-0.0
-0.4
mouse_post_colonization
Post-colonization (Day 12) - Cage2;Mouse1
-0.3
-0.5
-0.5
-0.1
-0.2
mouse_peg_treatment
PEG (Day 1 ) - Cage1;Mouse5
-0.2
-0.6
-0.5
+0.0
-0.2
mouse_post_colonization
Post-colonization (Day 14) - Cage2;Mouse2
-0.6
-0.2
-0.4
-0.1
-0.2
mouse_post_colonization
Post-colonization (Day 10) - Cage5;Mouse3
-0.1
-0.6
-0.4
-0.1
-0.3
mouse_post_colonization
Post-colonization (Day 12) - Cage1;Mouse3
-0.3
-0.4
-0.5
+0.1
-0.3
mouse
Post-colonization (Day 7) - Cage1B;Mouse5
-0.4
-0.4
-0.5
-0.0
-0.1
mouse_post_colonization
Post-colonization (Day 10) - Cage6;Mouse1
-0.2
-0.5
-0.5
-0.0
-0.2
mouse_post_colonization
Post-colonization (Day 12) - Cage5;Mouse4
-0.4
-0.4
-0.3
-0.0
-0.4
mouse_peg_treatment
PEG (Day 1) - Cage2;Mouse1
-0.2
-0.6
-0.1
-0.1
-0.4
mouse_peg_treatment
PEG (Day 1) - Cage3;Mouse1
-0.4
-0.1
-0.6
+0.0
-0.4
mouse
Post-colonization (Day 7) - Cage1C;Mouse2
-0.3
-0.6
-0.4
+0.2
-0.2
mouse_peg_treatment
PEG (Day 3) - Cage1;Mouse2
-0.1
-0.9
-0.1
+0.1
-0.3
stress
BHIS with Simvastatin 30 uM
-0.1
-0.9
-0.5
+0.1
+0.2
stress
BHIS with Cephalothin 0.1 mM
-0.1
-0.2
-0.1
+0.1
+1.1
stress
BHIS with Econazole nitrate salt 0.0125 mM
-0.2
-0.0
-0.2
-0.0
+2.1
stress
BHIS with Ciprofloxacin Hydrochloride 0.025 mM
-0.1
+0.0
-0.0
+0.1
+2.5
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