Fitness for 5 genes in Bacteroides thetaiotaomicron VPI-5482

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500 ntBT2920 and BT2921 are separated by 17 nucleotidesBT2921 and BT2922 are separated by 31 nucleotidesBT2922 and BT2923 are separated by 310 nucleotidesBT2923 and BT2924 are separated by 99 nucleotides BT2920: BT2920 - putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file), at 3,662,793 to 3,665,987 BT2920 BT2921: BT2921 - conserved hypothetical protein (NCBI ptt file), at 3,666,005 to 3,667,087 BT2921 BT2922: BT2922 - beta-galactosidase (NCBI ptt file), at 3,667,119 to 3,668,933 BT2922 BT2923: BT2923 - two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file), at 3,669,244 to 3,673,260 BT2923 BT2924: BT2924 - acetyl-CoA synthetase (NCBI ptt file), at 3,673,360 to 3,675,420 BT2924
Group Condition BT2920 BT2921 BT2922 BT2923 BT2924
mouse_peg_treatment PEG (Day 2) - Cage4;Mouse1 -0.7 -0.9 -1.0 +0.1 -0.1
mouse_post_colonization Post-colonization (Day 14) - Cage1;Mouse3 -0.3 -0.3 -1.0 +0.0 -0.4
mouse_recovery_after_peg Post-colonization (Day 14) - Cage4;Mouse2 -0.5 -0.6 -0.6 -0.0 -0.2
mouse_post_colonization Post-colonization (Day 12) - Cage4;Mouse1 -0.5 -0.6 -0.6 -0.1 -0.2
mouse_peg_treatment PEG (Day 3) - Cage2;Mouse1 -0.4 -0.4 -0.8 +0.1 -0.3
mouse Post-colonization (Day 7) - Cage1A;Mouse1 -0.5 -0.5 -0.5 -0.0 -0.3
mouse_post_colonization Post-colonization (Day 14) - Cage5;Mouse1 -0.5 -0.6 -0.5 +0.0 -0.2
mouse_post_colonization Post-colonization (Day 14) - Cage7;Mouse3 -0.3 -0.8 -0.4 -0.0 -0.2
mouse_peg_treatment PEG (Day 2) - Cage5;Mouse1 -0.3 -0.7 -0.7 +0.1 -0.1
mouse_post_colonization Post-colonization (Day 10) - Cage1;Mouse4 -0.3 -0.6 -0.5 -0.1 -0.2
mouse_peg_treatment PEG (Day 1) - Cage4;Mouse1 -0.5 -0.4 -0.8 -0.1 +0.0
mouse_post_colonization Post-colonization (Day 12) - Cage7;Mouse1 -0.4 -0.2 -0.8 +0.1 -0.4
mouse_post_colonization Post-colonization (Day 12) - Cage4;Mouse5 -0.2 -0.8 -0.4 -0.2 -0.2
mouse_post_colonization Post-colonization (Day 12) - Cage5;Mouse3 -0.3 -0.4 -0.6 -0.0 -0.4
mouse_post_colonization Post-colonization (Day 12) - Cage2;Mouse1 -0.3 -0.5 -0.5 -0.1 -0.2
mouse_peg_treatment PEG (Day 1 ) - Cage1;Mouse5 -0.2 -0.6 -0.5 +0.0 -0.2
mouse_post_colonization Post-colonization (Day 14) - Cage2;Mouse2 -0.6 -0.2 -0.4 -0.1 -0.2
mouse_post_colonization Post-colonization (Day 10) - Cage5;Mouse3 -0.1 -0.6 -0.4 -0.1 -0.3
mouse_post_colonization Post-colonization (Day 12) - Cage1;Mouse3 -0.3 -0.4 -0.5 +0.1 -0.3
mouse Post-colonization (Day 7) - Cage1B;Mouse5 -0.4 -0.4 -0.5 -0.0 -0.1
mouse_post_colonization Post-colonization (Day 10) - Cage6;Mouse1 -0.2 -0.5 -0.5 -0.0 -0.2
mouse_post_colonization Post-colonization (Day 12) - Cage5;Mouse4 -0.4 -0.4 -0.3 -0.0 -0.4
mouse_peg_treatment PEG (Day 1) - Cage2;Mouse1 -0.2 -0.6 -0.1 -0.1 -0.4
mouse_peg_treatment PEG (Day 1) - Cage3;Mouse1 -0.4 -0.1 -0.6 +0.0 -0.4
mouse Post-colonization (Day 7) - Cage1C;Mouse2 -0.3 -0.6 -0.4 +0.2 -0.2
mouse_peg_treatment PEG (Day 3) - Cage1;Mouse2 -0.1 -0.9 -0.1 +0.1 -0.3
stress BHIS with Simvastatin 30 uM -0.1 -0.9 -0.5 +0.1 +0.2
stress BHIS with Cephalothin 0.1 mM -0.1 -0.2 -0.1 +0.1 +1.1
stress BHIS with Econazole nitrate salt 0.0125 mM -0.2 -0.0 -0.2 -0.0 +2.1
stress BHIS with Ciprofloxacin Hydrochloride 0.025 mM -0.1 +0.0 -0.0 +0.1 +2.5
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