Fitness for 5 genes in Bacteroides thetaiotaomicron VPI-5482

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500 ntBT2915 and BT2916 are separated by 83 nucleotidesBT2916 and BT2917 are separated by 14 nucleotidesBT2917 and BT2918 are separated by 24 nucleotidesBT2918 and BT2919 are separated by 19 nucleotides BT2915: BT2915 - putative secreted protein (NCBI ptt file), at 3,656,629 to 3,657,603 BT2915 BT2916: BT2916 - conserved hypothetical protein (NCBI ptt file), at 3,657,687 to 3,658,910 BT2916 BT2917: BT2917 - hypothetical protein (NCBI ptt file), at 3,658,925 to 3,659,599 BT2917 BT2918: BT2918 - hypothetical protein (NCBI ptt file), at 3,659,624 to 3,660,838 BT2918 BT2919: BT2919 - putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file), at 3,660,858 to 3,662,780 BT2919
Group Condition BT2915 BT2916 BT2917 BT2918 BT2919
stress BHIS with Lincomycin 0.0015625 mM -0.4 -0.1 -0.2 -0.6 -0.3
stress Varel_Bryant_medium_Glucose with Econazole nitrate salt 0.025 mM -0.5 -0.0 +0.0 -0.7 -0.2
stress Varel_Bryant_medium_Glucose with Ciprofloxacin Hydrochloride 0.05 mM -0.2 -0.0 -0.5 -0.4 -0.3
stress Varel_Bryant_medium_Glucose with Econazole nitrate salt 0.0125 mM -0.2 -0.2 -0.2 -0.6 -0.2
stress Varel_Bryant_medium_Glucose with Furaltadone 0.1 mM -0.3 -0.1 -0.4 -0.3 -0.2
stress Varel_Bryant_medium_Glucose with Ciprofloxacin Hydrochloride 0.025 mM +0.0 -0.3 +0.0 -0.7 -0.4
stress Varel_Bryant_medium_Glucose with Irgasan 0.025 mM -0.2 +0.0 -0.3 -0.5 -0.4
stress BHIS with Dimethyl Sulfoxide 0.2 vol% -0.1 -0.0 -0.2 -0.5 -0.5
stress Varel_Bryant_medium_Glucose with Geneticin G418 0.2 mM -0.2 +0.1 -0.3 -0.6 -0.4
stress Varel_Bryant_medium_Glucose with Bile salts 0.5 mg/mL; pH 7 -0.5 -0.0 +0.1 -0.5 -0.2
phage SJC15_cps8_1MOI -0.5 -0.7 -0.2 +0.1 +0.2
stress BHIS with Rifampicin 0.000048828125 mM +0.1 +0.1 -0.3 -0.7 -0.2
carbon source Heparin from porcine intestinal mucosa (C) -0.2 -0.2 -0.5 -0.2 +0.2
carbon source D-Glucose 20mM (C) +0.2 -0.6 +0.3 -0.1 -0.6
carbon source Heparin from porcine intestinal mucosa (C) -0.1 -0.1 -0.5 -0.2 +0.3
phage DAC22_cps8_0.1MOI +0.2 -0.4 +0.1 -0.4 -0.1
phage SJC15_cps8_1MOI -0.1 -0.7 +0.1 +0.2 +0.3
survival aerobic shaking 48 hr copy A -0.4 -0.1 +0.2 +0.4 -0.1
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen -0.1 -0.1 +0.8 -0.3 -0.4
mouse_post_colonization Post-colonization (Day 14) - Cage7;Mouse3 +0.3 -0.2 -0.4 +0.5 -0.1
stress BHIS with Doxycycline hyclate 0.0001953125 mM -0.4 -0.0 -0.1 +0.5 +0.2
mouse_peg_treatment PEG (Day 1) - Cage4;Mouse1 +0.3 +0.0 -0.1 +0.6 -0.3
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen -0.2 -0.0 +1.0 -0.0 -0.2
phage HNL05_cps7_0.1MOI +0.2 -0.5 +0.1 +0.3 +0.5
mouse_post_colonization Post-colonization (Day 12) - Cage7;Mouse3 +0.5 +0.1 -0.0 +0.5 -0.3
mouse_peg_treatment PEG (Day 1) - Cage3;Mouse1 +0.2 +0.1 -0.2 +0.8 -0.2
mouse_peg_treatment PEG (Day 2) - Cage4;Mouse1 +0.5 -0.2 -0.3 +0.9 -0.0
mouse_peg_treatment PEG (Day 3) - Cage1;Mouse2 +0.4 -0.1 -0.2 +0.5 +0.2
mouse_post_colonization Post-colonization (Day 12) - Cage7;Mouse1 +0.6 +0.1 -0.2 +0.4 +0.1
mouse_peg_treatment PEG (Day 3) - Cage2;Mouse1 +0.5 +0.1 +0.1 +0.6 +0.3
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