Fitness for 5 genes in Bacteroides thetaiotaomicron VPI-5482

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500 ntBT2831 and BT2832 overlap by 20 nucleotidesBT2832 and BT2833 are separated by 3 nucleotidesBT2833 and BT2834 are separated by 27 nucleotidesBT2834 and BT2835 are separated by 165 nucleotides BT2831: BT2831 - rhomboid family protein (NCBI ptt file), at 3,529,445 to 3,530,119 BT2831 BT2832: BT2832 - rhomboid family protein (NCBI ptt file), at 3,530,100 to 3,531,002 BT2832 BT2833: BT2833 - hypothetical protein (NCBI ptt file), at 3,531,006 to 3,532,091 BT2833 BT2834: BT2834 - peptidyl-dipeptidase (NCBI ptt file), at 3,532,119 to 3,534,203 BT2834 BT2835: BT2835 - protein-export membrane protein SecD/SecF (NCBI ptt file), at 3,534,369 to 3,537,401 BT2835
Group Condition BT2831 BT2832 BT2833 BT2834 BT2835
nitrogen source L-aspartic (N) N.D. N.D. -2.4 -0.2 N.D.
stress Varel_Bryant_medium_Glucose with Deoxycholic 0.075 mg/ml N.D. N.D. -2.2 -0.2 N.D.
stress Varel_Bryant_medium_Glucose with Chenodeoxycholic 0.5 mg/ml N.D. N.D. -2.4 +0.1 N.D.
stress Varel_Bryant_medium_Glucose with Chenodeoxycholic 0.25 mg/ml N.D. N.D. -2.1 -0.1 N.D.
nitrogen source L-Leucine (N) N.D. N.D. -1.8 +0.1 N.D.
stress Varel_Bryant_medium_Glucose with Vancomycin Hydrochloride from Streptomyces orientalis 0.0125 mM N.D. N.D. -1.4 -0.2 N.D.
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen N.D. N.D. -1.4 -0.2 N.D.
nitrogen source L-Valine (N) N.D. N.D. -1.5 -0.1 N.D.
stress Varel_Bryant medium with Chlorpromazine 0.0125 mM N.D. N.D. -1.5 -0.1 N.D.
stress Varel_Bryant_medium_Glucose with Ethanol 3.33 vol% N.D. N.D. -1.2 -0.3 N.D.
stress Varel_Bryant_medium_Glucose with Deoxycholic 0.075 mg/ml N.D. N.D. -1.6 +0.1 N.D.
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen N.D. N.D. -1.6 +0.2 N.D.
stress Varel_Bryant_medium_Glucose with Indolicidin 0.002 mg/ml N.D. N.D. -1.0 -0.3 N.D.
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_DTT_noNitrogen N.D. N.D. -1.3 -0.1 N.D.
stress Varel_Bryant medium with Chlorpromazine 0.05 mM N.D. N.D. -1.1 -0.2 N.D.
stress Varel_Bryant_medium_Glucose with Indolicidin 0.002 mg/ml N.D. N.D. -0.8 -0.5 N.D.
stress Varel_Bryant_medium_Glucose with Deoxycholic 0.1 mg/ml N.D. N.D. -1.0 -0.2 N.D.
stress Varel_Bryant_medium_Glucose with Deoxycholic 0.2 mg/ml N.D. N.D. -1.0 -0.1 N.D.
carbon source D-Glucose 2.5 mg/ml (C) N.D. N.D. -0.7 -0.3 N.D.
nitrogen source N-Acetyl-D-glucosamine (N) N.D. N.D. -0.9 -0.1 N.D.
stress Bile salts 0.5 mg/ml N.D. N.D. -1.0 -0.1 N.D.
carbon source a-Cyclodextrin 2.5 mg/ml (C) N.D. N.D. -0.6 -0.4 N.D.
mouse_peg_treatment PEG (Day 3) - Cage3;Mouse2 N.D. N.D. -0.7 -0.3 N.D.
carbon source Mannan from Saccharomyces cerevisiae; filtered 2.5 mg/ml (C) N.D. N.D. -0.4 -0.6 N.D.
stress Varel_Bryant_medium_Glucose with Lithocholic 0.2 mg/ml N.D. N.D. -1.1 +0.1 N.D.
nitrogen source L-Glutamine (N) N.D. N.D. -1.0 +0.1 N.D.
nitrogen source D-Glucosamine Hydrochloride (N) N.D. N.D. -0.9 +0.1 N.D.
phage SJC16_cps8_1MOI N.D. N.D. -0.7 +0.4 N.D.
stress BHIS with Vancomycin Hydrochloride from Streptomyces orientalis 0.0125 mM N.D. N.D. +1.2 -0.2 N.D.
stress BHIS with Chlorpromazine 0.1 mM N.D. N.D. +1.0 -0.0 N.D.
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