Fitness for 5 genes in Bacteroides thetaiotaomicron VPI-5482

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BT2810	BT2811	BT2812	BT2813	BT2814
survival	aerobic shaking 48 hr copy B	-0.1	-2.2	-1.1	-0.1	-0.2
survival	aerobic shaking 48 hr copy A	-0.1	-1.2	-1.2	-0.1	-0.0
mouse_peg_treatment	PEG (Day 3) - Cage2;Mouse1	-0.3	-0.6	-0.7	-0.2	-0.1
stress	BHIS with Dimetridazole 0.0015625 mM	-0.2	-0.3	-0.4	-0.4	-0.7
mouse_post_colonization	Post-colonization (Day 2) - Cage3;Mouse2	+0.1	-0.6	-1.2	+0.0	-0.2
mouse_post_colonization	Post-colonization (Day 2) - Cage5;Mouse3	-0.1	-0.7	-1.0	+0.0	-0.2
mouse_post_colonization	Post-colonization (Day 12) - Cage1;Mouse5	-0.2	-0.6	-0.9	-0.2	+0.1
stress	BHIS with 5-Fluorouracil 0.1 mM	-0.4	-0.2	-0.4	-0.4	-0.4
mouse_coculture	cage1; mouse1; day4; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003	-0.3	-0.4	-0.5	-0.2	-0.3
mouse_coculture	cage1; mouse1; day3; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003	-0.1	-0.6	-0.5	-0.2	-0.3
mouse_coculture	cage1; mouse2; day4; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003	-0.3	-0.5	-0.7	-0.2	+0.1
stress	BHIS with Cefoxitin 0.025 mM	-0.2	-0.3	-0.3	-0.3	-0.5
carbon source	Heparin from porcine intestinal mucosa (C)	-0.2	-0.7	+0.0	-0.6	-0.2
mouse_coculture	cage1; mouse2; day3; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003	-0.2	-0.6	-0.7	-0.3	+0.2
mouse_post_colonization	Post-colonization (Day 10) - Cage2;Mouse1	-0.1	-0.6	-0.7	-0.3	+0.1
mouse	Post-colonization (Day 7) - Cage1B;Mouse5	-0.1	-0.8	-0.3	-0.4	+0.1
stress	BHIS with Chlorhexidine diacetate salt 0.0015625 mM	-0.3	+0.0	-0.4	-0.3	-0.5
mouse_post_colonization	Post-colonization (Day 10) - Cage5;Mouse3	-0.2	-0.5	-0.7	-0.2	+0.3
mouse_peg_treatment	PEG (Day 2) - Cage4;Mouse1	-0.1	-0.0	-1.2	-0.1	+0.2
mouse_post_colonization	Post-colonization (Day 12) - Cage7;Mouse1	-0.1	-0.5	-0.6	-0.1	+0.2
mouse_post_colonization	Post-colonization (Day 14) - Cage3;Mouse1	-0.1	-0.3	-0.9	-0.2	+0.4
mouse_coculture	cage1; mouse2; day2; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003	-0.4	-0.6	-0.3	-0.2	+0.4
mouse_post_colonization	Post-colonization (Day 3) - Cage4;Mouse1	+0.0	-0.4	-0.8	-0.2	+0.3
mouse_peg_treatment	PEG (Day 3) - Cage1;Mouse2	-0.1	-0.6	-0.5	-0.1	+0.3
mouse_peg_treatment	PEG (Day 2) - Cage3;Mouse3	-0.3	-0.4	-0.4	-0.0	+0.4
mouse_post_colonization	Post-colonization (Day 3) - Cage6;Mouse1	-0.1	-0.6	-0.6	+0.1	+0.3
stress	BHIS with Simvastatin 30 uM	+0.1	+0.1	-0.9	+0.5	-0.1
nitrogen source	L-Asparagine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen	+0.2	+0.3	-0.6	-0.4	+0.3
stress	BHIS with Cephalothin 0.2 mM	-0.3	-0.4	+0.5	-0.2	+0.3
stress	BHIS with Fusidic 0.002 mg/ml	-0.0	+0.4	-0.6	+0.4	+0.3