Fitness for 5 genes in Bacteroides thetaiotaomicron VPI-5482

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BT2809	BT2810	BT2811	BT2812	BT2813
carbon source	D-Ribose (C)	-4.8	-0.1	-0.3	+0.2	-0.2
survival	aerobic shaking 48 hr copy B	+0.1	-0.1	-2.2	-1.1	-0.1
survival	aerobic shaking 48 hr copy A	+0.1	-0.1	-1.2	-1.2	-0.1
mouse_peg_treatment	PEG (Day 3) - Cage2;Mouse1	-0.3	-0.3	-0.6	-0.7	-0.2
mouse_post_colonization	Post-colonization (Day 12) - Cage1;Mouse5	-0.2	-0.2	-0.6	-0.9	-0.2
mouse_coculture	cage1; mouse2; day3; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003	-0.2	-0.2	-0.6	-0.7	-0.3
mouse_post_colonization	Post-colonization (Day 2) - Cage3;Mouse2	-0.1	+0.1	-0.6	-1.2	+0.0
mouse_post_colonization	Post-colonization (Day 14) - Cage5;Mouse1	-0.5	-0.0	-0.3	-0.6	-0.2
mouse_coculture	cage1; mouse2; day4; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003	-0.0	-0.3	-0.5	-0.7	-0.2
stress	BHIS with Dimetridazole 0.0015625 mM	-0.4	-0.2	-0.3	-0.4	-0.4
mouse	Post-colonization (Day 7) - Cage1B;Mouse5	-0.0	-0.1	-0.8	-0.3	-0.4
mouse_post_colonization	Post-colonization (Day 10) - Cage5;Mouse3	-0.1	-0.2	-0.5	-0.7	-0.2
mouse_coculture	cage1; mouse1; day5; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003	-0.3	-0.3	-0.4	-0.6	-0.1
stress	BHIS with Doxycycline hyclate 0.0001953125 mM	-0.1	-0.2	-0.3	-0.8	-0.2
mouse_peg_treatment	PEG (Day 1) - Cage4;Mouse1	-0.4	+0.0	-0.1	-0.9	-0.2
mouse_post_colonization	Post-colonization (Day 1) - Cage7;Mouse2	-0.4	-0.2	-0.3	-0.7	-0.1
mouse_coculture	cage1; mouse1; day4; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003	-0.2	-0.3	-0.4	-0.5	-0.2
mouse_peg_treatment	PEG (Day 2) - Cage4;Mouse1	-0.2	-0.1	-0.0	-1.2	-0.1
mouse_post_colonization	Post-colonization (Day 14) - Cage3;Mouse1	-0.1	-0.1	-0.3	-0.9	-0.2
mouse_post_colonization	Post-colonization (Day 3) - Cage4;Mouse1	-0.2	+0.0	-0.4	-0.8	-0.2
carbon source	Heparin from porcine intestinal mucosa (C)	-0.1	-0.2	-0.7	+0.0	-0.6
mouse_post_colonization	Post-colonization (Day 2) - Cage5;Mouse3	+0.1	-0.1	-0.7	-1.0	+0.0
mouse_post_colonization	Post-colonization (Day 10) - Cage2;Mouse1	+0.2	-0.1	-0.6	-0.7	-0.3
nitrogen source	L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen	-0.4	+0.1	-0.4	-0.5	-0.1
stress	BHIS with Paraquat dichloride 0.1 mg/ml	-0.4	+0.1	-0.4	-0.4	-0.4
mouse_coculture	cage1; mouse2; day2; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003	+0.2	-0.4	-0.6	-0.3	-0.2
stress	BHIS with Deoxycholic 0.2 mg/ml	-0.4	-0.5	+0.2	-0.6	+0.0
stress	BHIS with 5-Fluorouracil 0.1 mM	+0.2	-0.4	-0.2	-0.4	-0.4
stress	BHIS with Simvastatin 30 uM	-0.2	+0.1	+0.1	-0.9	+0.5
nitrogen source	L-Asparagine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen	+0.3	+0.2	+0.3	-0.6	-0.4