Fitness for 5 genes in Bacteroides thetaiotaomicron VPI-5482

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BT2807	BT2808	BT2809	BT2810	BT2811
carbon source	D-Ribose (C)	+0.6	+0.0	-4.8	-0.1	-0.3
survival	aerobic shaking 48 hr copy B	+0.2	-0.1	+0.1	-0.1	-2.2
stress	BHIS with Dimetridazole 0.0015625 mM	-0.4	-0.4	-0.4	-0.2	-0.3
mouse_post_colonization	Post-colonization (Day 8) - Cage6;Mouse2	-0.3	-0.6	-0.4	-0.3	-0.0
mouse_coculture	cage1; mouse1; day5; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003	-0.3	-0.2	-0.3	-0.3	-0.4
mouse_peg_treatment	PEG (Day 2) - Cage3;Mouse3	-0.2	-0.2	-0.3	-0.3	-0.4
mouse_post_colonization	Post-colonization (Day 14) - Cage4;Mouse4	-0.2	-0.4	-0.5	+0.0	-0.4
mouse_post_colonization	Post-colonization (Day 12) - Cage1;Mouse5	-0.1	-0.3	-0.2	-0.2	-0.6
mouse_coculture	cage1; mouse2; day4; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003	-0.3	-0.2	-0.0	-0.3	-0.5
mouse_peg_treatment	PEG (Day 1) - Cage2;Mouse1	-0.2	-0.1	-0.2	-0.2	-0.5
mouse_coculture	cage1; mouse3; day5; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003	-0.1	-0.3	-0.3	-0.1	-0.5
mouse_coculture	cage1; mouse1; day4; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003	-0.2	-0.2	-0.2	-0.3	-0.4
mouse_coculture	cage1; mouse2; day3; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003	-0.1	-0.2	-0.2	-0.2	-0.6
mouse_post_colonization	Post-colonization (Day 10) - Cage1;Mouse4	-0.1	-0.6	-0.2	-0.3	-0.2
mouse_peg_treatment	PEG (Day 3) - Cage2;Mouse1	-0.2	+0.2	-0.3	-0.3	-0.6
mouse_post_colonization	Post-colonization (Day 10) - Cage5;Mouse3	-0.2	-0.2	-0.1	-0.2	-0.5
stress	BHIS with Trimethoprim 0.00625 mM	+0.1	-0.4	-0.2	-0.3	-0.4
mouse_peg_treatment	PEG (Day 1) - Cage3;Mouse4	+0.1	-0.1	-0.3	-0.1	-0.7
survival	aerobic shaking 48 hr copy A	+0.2	+0.1	+0.1	-0.1	-1.2
stress	BHIS with 5-Fluorouracil 0.1 mM	-0.2	-0.4	+0.2	-0.4	-0.2
mouse_coculture	cage1; mouse3; day3; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003	-0.1	-0.3	+0.2	-0.3	-0.4
mouse_coculture	cage1; mouse2; day2; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003	-0.1	+0.0	+0.2	-0.4	-0.6
phage	DAC19_cps8_0.1MOI	-0.1	-0.4	+0.3	-0.3	-0.3
phage	DAC16_cps7_0.1MOI	-0.1	-0.3	+0.3	-0.2	-0.5
stress	BHIS with Trimethoprim 0.00625 mM	+0.1	-0.3	+0.2	-0.1	-0.5
stress	BHIS with Chenodeoxycholic 0.25 mg/ml	+0.3	-0.3	-0.4	-0.5	+0.3
stress	BHIS with Deoxycholic 0.2 mg/ml	+0.3	+0.0	-0.4	-0.5	+0.2
stress	BHIS with Dimetridazole 0.025 mM	+0.4	-0.3	-0.5	+0.1	+0.3
stress	Varel_Bryant_medium_Glucose with Rifampicin 0.0001953125 mM	+0.3	+0.3	+0.3	-0.0	+0.4
stress	BHIS with Fusidic 0.004 mg/ml	+0.5	+0.1	+0.5	-0.1	+0.4