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Protein
Homologs
Fitness for 5 genes in
Bacteroides thetaiotaomicron VPI-5482
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
BT2772 and BT2773 are separated by 15 nucleotides
BT2773 and BT2774 are separated by 23 nucleotides
BT2774 and BT2775 are separated by 1152 nucleotides
BT2775 and BT2776 are separated by 123 nucleotides
BT2772: BT2772 - putative protein phosphatase (NCBI ptt file), at 3,434,041 to 3,435,690
BT2772
BT2773: BT2773 - conserved hypothetical protein (NCBI ptt file), at 3,435,706 to 3,436,281
BT2773
BT2774: BT2774 - putative adenylate cyclase (NCBI ptt file), at 3,436,305 to 3,437,786
BT2774
BT2775: BT2775 - putative helicase (NCBI ptt file), at 3,438,939 to 3,441,047
BT2775
BT2776: BT2776 - hypothetical protein (NCBI ptt file), at 3,441,171 to 3,442,340
BT2776
Group
Condition
BT2772
BT2773
BT2774
BT2775
BT2776
nitrogen source
L-aspartic (N)
-0.3
-0.2
-0.3
-0.3
-0.4
stress
BHIS with Dimethyl Sulfoxide 10 vol%
-0.4
-0.2
-0.9
-0.0
+0.0
stress
BHIS with Dimethyl Sulfoxide 10 vol%
-0.3
-0.9
-0.7
+0.1
+0.4
stress
BHIS with Dimethyl Sulfoxide 9 vol%
-0.3
-0.5
-0.7
+0.1
+0.2
stress
BHIS with Simvastatin 30 uM
+0.2
+0.1
-0.9
+0.1
-0.4
stress
BHIS with Deoxycholic 0.2 mg/ml
-0.4
+0.2
-1.1
+0.3
+0.1
stress
BHIS with Lithocholic 0.4 mg/ml
-0.3
+0.2
-0.7
+0.1
+0.3
stress
BHIS with Chenodeoxycholic 0.25 mg/ml
-0.5
+0.2
-0.6
+0.1
+0.5
mouse_post_colonization
Post-colonization (Day 12) - Cage5;Mouse2
-0.3
-0.2
+0.6
-0.3
+0.2
carbon source
L-Rhamnose (C)
+0.3
+0.2
+0.5
-0.4
-0.3
carbon source
L-Rhamnose (C)
+0.4
-0.0
+0.6
-0.2
-0.4
mouse_recovery_after_peg
Post-colonization (Day 14) - Cage4;Mouse2
-0.4
-0.1
+0.8
-0.2
+0.3
mouse_post_colonization
Post-colonization (Day 12) - Cage7;Mouse1
+0.1
-0.3
+0.6
-0.4
+0.4
phage
DAC19_cps8_0.1MOI
+0.3
+0.4
+0.5
-0.2
-0.2
phage
SJC16_cps8_10MOI
+0.3
+0.4
+0.5
-0.4
-0.1
phage
SJC16_cps8_1MOI
+0.4
+0.3
+0.6
-0.2
-0.3
mouse_post_colonization
Post-colonization (Day 14) - Cage7;Mouse3
-0.3
+0.1
+0.8
-0.2
+0.6
carbon source
D-Ribose (C)
+0.2
+0.4
+1.0
-0.3
-0.4
mouse_peg_treatment
PEG (Day 1) - Cage4;Mouse1
+0.2
-0.2
+0.9
-0.3
+0.5
stress
BHIS with 5-Fluorouracil 0.2 mM
+0.1
+0.5
+1.0
-0.2
-0.3
mouse_post_colonization
Post-colonization (Day 14) - Cage5;Mouse1
+0.1
-0.2
+0.7
-0.1
+0.8
phage
HNL05_cps7_0.1MOI
+0.3
+0.4
+0.7
-0.1
-0.2
stress
BHIS with Trimethoprim 0.0125 mM
+0.5
+0.1
+0.9
+0.1
-0.3
stress
BHIS with 5-Fluorouracil 0.1 mM
+0.5
+0.3
+0.8
-0.1
-0.2
mouse_peg_treatment
PEG (Day 3) - Cage3;Mouse2
+0.4
+0.2
+0.5
-0.1
+0.3
stress
BHIS with Thioridazine 0.0125 mM
+0.2
+0.5
+1.0
-0.1
-0.2
stress
BHIS with 5-Fluorouracil 0.1 mM
+0.2
+0.8
+0.9
-0.0
-0.4
mouse_peg_treatment
PEG (Day 2) - Cage5;Mouse1
+0.3
-0.1
+0.8
-0.1
+0.8
stress
BHIS with Trimethoprim 0.00625 mM
+0.5
+0.5
+0.8
-0.0
-0.1
mouse_peg_treatment
PEG (Day 3) - Cage2;Mouse1
+0.5
-0.3
+0.9
+0.2
+0.4
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