Fitness for 5 genes in Bacteroides thetaiotaomicron VPI-5482

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500 ntBT2692 and BT2693 are separated by 97 nucleotidesBT2693 and BT2694 are separated by 28 nucleotidesBT2694 and BT2695 are separated by 120 nucleotidesBT2695 and BT2696 are separated by 51 nucleotides BT2692: BT2692 - imidazolonepropionase (NCBI ptt file), at 3,354,584 to 3,355,837 BT2692 BT2693: BT2693 - formiminotransferase-cyclodeaminase (NCBI ptt file), at 3,355,935 to 3,356,837 BT2693 BT2694: BT2694 - putative urocanate hydratase (NCBI ptt file), at 3,356,866 to 3,358,857 BT2694 BT2695: BT2695 - hypothetical protein (NCBI ptt file), at 3,358,978 to 3,359,646 BT2695 BT2696: BT2696 - hypothetical protein (NCBI ptt file), at 3,359,698 to 3,359,892 BT2696
Group Condition BT2692 BT2693 BT2694 BT2695 BT2696
stress BHIS with Fusidic 0.004 mg/ml -1.9 -0.2 -0.7 -0.3 -0.7
stress Varel_Bryant_medium_Glucose with Ciprofloxacin Hydrochloride 0.025 mM -1.1 -0.5 -0.6 -0.0 -0.6
stress BHIS with Simvastatin 30 uM -0.4 -0.1 +0.4 -1.3 -1.3
stress BHIS with Cefoxitin 0.025 mM -0.5 -1.1 -0.4 +0.3 -0.9
stress Varel_Bryant_medium_Glucose with Irgasan 0.025 mM -0.8 -0.4 -0.7 -0.1 -0.6
stress BHIS with Zinc Pyrithione 0.0125 mM -0.1 -0.7 -0.6 -0.2 -0.9
stress BHIS with Simvastatin 30 uM -0.5 +0.1 +0.1 -0.9 -1.3
stress BHIS with Simvastatin 30 uM -0.5 -0.1 +0.4 -1.2 -0.9
stress Varel_Bryant_medium_Glucose with 8-hydroxy-nitroquinoline 0.05 mM -0.8 -0.4 -0.8 -0.3 -0.3
survival aerobic shaking 48 hr copy B -0.9 -1.0 -0.1 +0.4 -0.8
mouse_peg_treatment PEG (Day 3) - Cage3;Mouse2 -0.2 -0.1 +0.3 -0.2 -2.1
stress Varel_Bryant_medium_Glucose with Geneticin G418 0.2 mM -0.4 -0.2 -0.9 -0.5 -0.5
survival aerobic shaking 48 hr copy A -1.0 -1.0 -0.3 +0.6 -0.8
stress BHIS with Fusidic 0.004 mg/ml -0.8 -0.4 -0.4 -0.4 -0.3
stress BHIS with Ceftriaxone hemi(heptahydrate) 0.1 mM -0.5 -0.3 -0.3 +0.3 -1.4
stress BHIS with Oxytetracycline 0.000390625 mM -0.8 -0.2 -0.3 +0.3 -1.1
stress BHIS with DAMPA 60 uM +0.0 +0.1 -0.4 -0.1 -1.6
stress BHIS with Irgasan 0.0125 mM -0.5 -0.7 -0.4 +0.4 -0.8
stress BHIS with Chlorpromazine 0.1 mM -0.1 -0.5 -0.5 +0.3 -1.0
stress BHIS with Cefoxitin 0.0125 mM -0.7 -0.3 -0.5 +0.3 -0.5
stress BHIS with Chenodeoxycholic 0.25 mg/ml -0.6 +0.0 +0.0 +0.4 -1.5
mouse Post-colonization (Day 7) - Cage1B;Mouse5 +0.3 +0.2 -0.6 +0.4 -1.4
mouse Post-colonization (Day 7) - Cage1A;Mouse1 +0.0 +0.2 -0.3 +0.5 -1.4
nitrogen source Glucuronamide (N) -0.4 -0.1 -0.0 -0.9 +1.0
phage SJC16_cps8_10MOI -0.6 -1.3 +0.7 -0.1 +1.1
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_DTT_noNitrogen +0.2 -0.8 +0.5 -0.4 +0.3
phage HNL05_cps7_1MOI -0.3 -1.3 +0.2 +0.1 +1.4
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen -1.0 -0.0 +0.1 +0.3 +0.9
phage SJC16_cps8_1MOI -0.7 -0.4 +0.3 +0.5 +0.7
carbon source Mannan from Saccharomyces cerevisiae (C) +0.2 +0.2 +0.1 -0.8 +0.9
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