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Fitness for 5 genes in
Bacteroides thetaiotaomicron VPI-5482
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
BT2691 and BT2692 are separated by 21 nucleotides
BT2692 and BT2693 are separated by 97 nucleotides
BT2693 and BT2694 are separated by 28 nucleotides
BT2694 and BT2695 are separated by 120 nucleotides
BT2691: BT2691 - methenyltetrahydrofolate cyclohydrolase (NCBI ptt file), at 3,353,933 to 3,354,562
BT2691
BT2692: BT2692 - imidazolonepropionase (NCBI ptt file), at 3,354,584 to 3,355,837
BT2692
BT2693: BT2693 - formiminotransferase-cyclodeaminase (NCBI ptt file), at 3,355,935 to 3,356,837
BT2693
BT2694: BT2694 - putative urocanate hydratase (NCBI ptt file), at 3,356,866 to 3,358,857
BT2694
BT2695: BT2695 - hypothetical protein (NCBI ptt file), at 3,358,978 to 3,359,646
BT2695
Group
Condition
BT2691
BT2692
BT2693
BT2694
BT2695
stress
BHIS with Fusidic 0.004 mg/ml
-1.4
-1.9
-0.2
-0.7
-0.3
phage
HNL05_cps7_1MOI
-1.7
-0.3
-1.3
+0.2
+0.1
stress
Varel_Bryant_medium_Glucose with Zinc Pyrithione 0.05 mM
-1.5
-0.2
-1.0
-0.2
-0.0
stress
Varel_Bryant_medium_Glucose with Phenazine ethosulfate 0.2 mM
-1.3
-0.7
+0.0
-0.7
-0.0
stress
Varel_Bryant_medium_Glucose with Trimethoprim 0.0125 mM
-1.1
-0.4
-0.6
-0.5
-0.2
phage
SJC16_cps8_10MOI
-1.4
-0.6
-1.3
+0.7
-0.1
stress
BHIS with 5-Fluorouracil 0.1 mM
-1.8
-0.1
-0.2
+0.2
-0.8
stress
BHIS with Cephalothin 0.625 mg/ml
-1.0
-0.6
-0.8
-0.2
+0.1
stress
BHIS with Thioridazine 0.0125 mM
-0.9
-0.6
-0.7
-0.4
+0.2
phage
ARB14_cps1_0.1MOI
-1.2
-0.3
-1.3
+0.3
+0.1
survival
aerobic shaking 48 hr copy A
-0.7
-1.0
-1.0
-0.3
+0.6
stress
BHIS with Paraquat dichloride 0.1 mg/ml
-2.3
+0.1
-0.1
+0.0
+0.0
carbon source
D-Galacturonic Acid (C)
-1.6
+0.0
-0.5
-0.4
+0.2
stress
Varel_Bryant_medium_Glucose with Trimethoprim 0.025 mM
-0.7
-0.6
+0.2
-0.7
-0.4
stress
BHIS with Cefoxitin 0.025 mM
-0.4
-0.5
-1.1
-0.4
+0.3
stress
Varel_Bryant_medium_Glucose with Chlorpromazine 0.1 mM
-0.7
+0.0
+0.3
-0.9
-0.9
carbon source
Red Arabinan from sugar-beet (C)
-1.3
+0.4
-0.6
-0.0
-0.5
stress
BHIS with 2-Mercaptopyridine N-oxide 0.1 mM
-0.9
-0.6
-0.4
-0.5
+0.3
nitrogen source
L-Serine (N); Varel_Bryant_medium_Glucose_DTT_noNitrogen
-1.4
+0.3
-0.7
+0.2
-0.4
stress
BHIS with Chlorpromazine 0.1 mM
-0.4
-0.6
-0.7
-0.4
+0.4
survival
aerobic shaking 48 hr copy B
+0.3
-0.9
-1.0
-0.1
+0.4
phage
SJC15_cps8_1MOI
-1.6
-0.0
-0.3
+0.2
+0.4
nitrogen source
L-Serine (N); Varel_Bryant_medium_Glucose_DTT_noNitrogen
-0.9
+0.2
-0.8
+0.5
-0.4
phage
SJC16_cps8_1MOI
-0.7
-0.7
-0.4
+0.3
+0.5
carbon source
Heparin from porcine intestinal mucosa (C)
-1.2
+0.1
+0.1
+0.8
-0.4
stress
BHIS with Doxycycline hyclate 0.000390625 mM
+0.3
-0.7
-0.0
-0.8
+0.6
stress
BHIS with Simvastatin 30 uM
+0.8
-0.4
-0.1
+0.4
-1.3
mouse_peg_treatment
PEG (Day 3) - Cage2;Mouse1
-1.4
-0.3
+0.3
+0.3
+0.9
carbon source
Heparin from porcine intestinal mucosa (C)
-0.9
+0.4
+0.5
+0.8
-0.1
mouse_post_colonization
Post-colonization (Day 8) - Cage6;Mouse2
+1.3
-0.2
+0.6
-0.2
-0.5
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