Fitness for 5 genes in Bacteroides thetaiotaomicron VPI-5482

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500 ntBT2691 and BT2692 are separated by 21 nucleotidesBT2692 and BT2693 are separated by 97 nucleotidesBT2693 and BT2694 are separated by 28 nucleotidesBT2694 and BT2695 are separated by 120 nucleotides BT2691: BT2691 - methenyltetrahydrofolate cyclohydrolase (NCBI ptt file), at 3,353,933 to 3,354,562 BT2691 BT2692: BT2692 - imidazolonepropionase (NCBI ptt file), at 3,354,584 to 3,355,837 BT2692 BT2693: BT2693 - formiminotransferase-cyclodeaminase (NCBI ptt file), at 3,355,935 to 3,356,837 BT2693 BT2694: BT2694 - putative urocanate hydratase (NCBI ptt file), at 3,356,866 to 3,358,857 BT2694 BT2695: BT2695 - hypothetical protein (NCBI ptt file), at 3,358,978 to 3,359,646 BT2695
Group Condition BT2691 BT2692 BT2693 BT2694 BT2695
stress BHIS with Fusidic 0.004 mg/ml -1.4 -1.9 -0.2 -0.7 -0.3
phage HNL05_cps7_1MOI -1.7 -0.3 -1.3 +0.2 +0.1
stress Varel_Bryant_medium_Glucose with Zinc Pyrithione 0.05 mM -1.5 -0.2 -1.0 -0.2 -0.0
stress Varel_Bryant_medium_Glucose with Phenazine ethosulfate 0.2 mM -1.3 -0.7 +0.0 -0.7 -0.0
stress Varel_Bryant_medium_Glucose with Trimethoprim 0.0125 mM -1.1 -0.4 -0.6 -0.5 -0.2
phage SJC16_cps8_10MOI -1.4 -0.6 -1.3 +0.7 -0.1
stress BHIS with 5-Fluorouracil 0.1 mM -1.8 -0.1 -0.2 +0.2 -0.8
stress BHIS with Cephalothin 0.625 mg/ml -1.0 -0.6 -0.8 -0.2 +0.1
stress BHIS with Thioridazine 0.0125 mM -0.9 -0.6 -0.7 -0.4 +0.2
phage ARB14_cps1_0.1MOI -1.2 -0.3 -1.3 +0.3 +0.1
survival aerobic shaking 48 hr copy A -0.7 -1.0 -1.0 -0.3 +0.6
stress BHIS with Paraquat dichloride 0.1 mg/ml -2.3 +0.1 -0.1 +0.0 +0.0
carbon source D-Galacturonic Acid (C) -1.6 +0.0 -0.5 -0.4 +0.2
stress Varel_Bryant_medium_Glucose with Trimethoprim 0.025 mM -0.7 -0.6 +0.2 -0.7 -0.4
stress BHIS with Cefoxitin 0.025 mM -0.4 -0.5 -1.1 -0.4 +0.3
stress Varel_Bryant_medium_Glucose with Chlorpromazine 0.1 mM -0.7 +0.0 +0.3 -0.9 -0.9
carbon source Red Arabinan from sugar-beet (C) -1.3 +0.4 -0.6 -0.0 -0.5
stress BHIS with 2-Mercaptopyridine N-oxide 0.1 mM -0.9 -0.6 -0.4 -0.5 +0.3
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_DTT_noNitrogen -1.4 +0.3 -0.7 +0.2 -0.4
stress BHIS with Chlorpromazine 0.1 mM -0.4 -0.6 -0.7 -0.4 +0.4
survival aerobic shaking 48 hr copy B +0.3 -0.9 -1.0 -0.1 +0.4
phage SJC15_cps8_1MOI -1.6 -0.0 -0.3 +0.2 +0.4
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_DTT_noNitrogen -0.9 +0.2 -0.8 +0.5 -0.4
phage SJC16_cps8_1MOI -0.7 -0.7 -0.4 +0.3 +0.5
carbon source Heparin from porcine intestinal mucosa (C) -1.2 +0.1 +0.1 +0.8 -0.4
stress BHIS with Doxycycline hyclate 0.000390625 mM +0.3 -0.7 -0.0 -0.8 +0.6
stress BHIS with Simvastatin 30 uM +0.8 -0.4 -0.1 +0.4 -1.3
mouse_peg_treatment PEG (Day 3) - Cage2;Mouse1 -1.4 -0.3 +0.3 +0.3 +0.9
carbon source Heparin from porcine intestinal mucosa (C) -0.9 +0.4 +0.5 +0.8 -0.1
mouse_post_colonization Post-colonization (Day 8) - Cage6;Mouse2 +1.3 -0.2 +0.6 -0.2 -0.5
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