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Protein
Homologs
Fitness for 5 genes in
Bacteroides thetaiotaomicron VPI-5482
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
BT2648 and BT2649 overlap by 4 nucleotides
BT2649 and BT2650 are separated by 97 nucleotides
BT2650 and BT2651 are separated by 57 nucleotides
BT2651 and BT2652 are separated by 347 nucleotides
BT2648: BT2648 - hypothetical protein (NCBI ptt file), at 3,301,054 to 3,301,755
BT2648
BT2649: BT2649 - ThiF family protein, ubiquitin-activating enzyme (NCBI ptt file), at 3,301,752 to 3,302,549
BT2649
BT2650: BT2650 - conserved hypothetical protein (NCBI ptt file), at 3,302,647 to 3,303,348
BT2650
BT2651: BT2651 - conserved hypothetical protein (NCBI ptt file), at 3,303,406 to 3,303,699
BT2651
BT2652: BT2652 - conserved hypothetical protein (NCBI ptt file), at 3,304,047 to 3,304,334
BT2652
Group
Condition
BT2648
BT2649
BT2650
BT2651
BT2652
stress
Varel_Bryant_medium_Glucose with Trimethoprim 0.025 mM
-0.1
-0.9
+0.1
-0.9
-1.7
carbon source
Mannan from Saccharomyces cerevisiae (C)
-0.5
-0.6
-0.4
-1.7
-0.1
nitrogen source
L-Serine (N); Varel_Bryant_medium_Glucose_DTT_noNitrogen
-0.4
-0.6
-0.5
-1.6
-0.0
stress
BHIS with Paraquat dichloride 0.1 mg/ml
-1.3
-0.1
+0.4
-1.5
-0.5
nitrogen source
L-aspartic (N)
-0.2
-0.4
-1.3
-0.8
-0.3
phage
SJC15_cps8_1MOI
-0.4
-0.4
-0.3
-0.1
-1.6
carbon source
Mannan from Saccharomyces cerevisiae; filtered 2.5 mg/ml (C)
-0.3
-0.7
-0.4
-1.6
+0.3
carbon source
Mannan from Saccharomyces cerevisiae; filtered 2.5 mg/ml (C)
-0.4
-0.6
-0.6
-1.3
+0.1
stress
BHIS with Vancomycin 0.016 mg/ml
-0.5
-0.1
-0.0
-0.7
-1.4
nitrogen source
L-Asparagine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen
+0.1
-0.2
-0.4
-0.9
-1.2
phage
SJC12_cps8_0.1MOI
-0.9
-0.1
+0.2
-0.7
-1.1
stress
Varel_Bryant_medium_Glucose with Sulfamethizole 0.1 mM
+0.1
-0.6
-0.3
-0.1
-1.7
carbon source
Mannan from Saccharomyces cerevisiae; autoclaved 2.5 mg/ml (C)
-0.3
-0.3
-0.8
-1.1
+0.2
stress
BHIS with Simvastatin 30 uM
+0.2
+0.2
+0.3
+0.4
-3.5
carbon source
(+)-Arabinogalactan; autoclaved 2.5 mg/ml (C)
-0.2
-0.3
+0.3
-1.7
-0.4
stress
Varel_Bryant_medium_Glucose with Chlorpromazine 0.1 mM
-0.5
-0.9
-1.1
-0.3
+0.6
phage
HNL05_cps7_0.1MOI
-0.4
-0.6
+0.3
-0.0
-1.4
stress
Varel_Bryant_medium_Glucose with Chenodeoxycholic 0.5 mg/ml
-0.4
-0.5
-0.4
-1.2
+0.3
carbon source
L-Rhamnose (C)
-1.0
-0.2
+0.3
-1.2
+0.1
stress
BHIS with Paraquat dichloride 0.1 mg/ml
-0.9
+0.0
+0.5
-1.4
-0.3
phage
DAC16_cps7_10MOI
-0.6
+0.3
+0.3
-0.1
-1.6
mouse_post_colonization
Post-colonization (Day 12) - Cage5;Mouse2
+0.1
-0.2
+0.0
+0.6
-2.3
phage
SJC16_cps8_1MOI
-1.0
-0.5
+0.2
-0.6
+0.5
stress
BHIS with Doxycycline hyclate 0.0001953125 mM
+0.2
+0.4
-0.1
+0.4
-1.6
nitrogen source
L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen
+0.1
-0.5
-0.3
-1.0
+1.2
phage
SJC16_cps8_10MOI
-0.9
+0.3
+0.3
-0.5
+1.4
stress
BHIS with Fusidic 0.004 mg/ml
+0.3
+0.3
+0.4
+0.9
-1.1
stress
BHIS with Fusidic 0.002 mg/ml
+0.6
+0.3
+0.4
+1.1
-1.2
mouse
Post-colonization (Day 7) - Cage1A;Mouse1
+0.6
-0.9
-0.2
+1.1
+1.2
mouse
Post-colonization (Day 7) - Cage1B;Mouse5
+0.8
+0.0
+0.5
+1.1
+0.9
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