Fitness for 5 genes in Bacteroides thetaiotaomicron VPI-5482

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500 ntBT2648 and BT2649 overlap by 4 nucleotidesBT2649 and BT2650 are separated by 97 nucleotidesBT2650 and BT2651 are separated by 57 nucleotidesBT2651 and BT2652 are separated by 347 nucleotides BT2648: BT2648 - hypothetical protein (NCBI ptt file), at 3,301,054 to 3,301,755 BT2648 BT2649: BT2649 - ThiF family protein, ubiquitin-activating enzyme (NCBI ptt file), at 3,301,752 to 3,302,549 BT2649 BT2650: BT2650 - conserved hypothetical protein (NCBI ptt file), at 3,302,647 to 3,303,348 BT2650 BT2651: BT2651 - conserved hypothetical protein (NCBI ptt file), at 3,303,406 to 3,303,699 BT2651 BT2652: BT2652 - conserved hypothetical protein (NCBI ptt file), at 3,304,047 to 3,304,334 BT2652
Group Condition BT2648 BT2649 BT2650 BT2651 BT2652
stress Varel_Bryant_medium_Glucose with Trimethoprim 0.025 mM -0.1 -0.9 +0.1 -0.9 -1.7
carbon source Mannan from Saccharomyces cerevisiae (C) -0.5 -0.6 -0.4 -1.7 -0.1
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_DTT_noNitrogen -0.4 -0.6 -0.5 -1.6 -0.0
stress BHIS with Paraquat dichloride 0.1 mg/ml -1.3 -0.1 +0.4 -1.5 -0.5
nitrogen source L-aspartic (N) -0.2 -0.4 -1.3 -0.8 -0.3
phage SJC15_cps8_1MOI -0.4 -0.4 -0.3 -0.1 -1.6
carbon source Mannan from Saccharomyces cerevisiae; filtered 2.5 mg/ml (C) -0.3 -0.7 -0.4 -1.6 +0.3
carbon source Mannan from Saccharomyces cerevisiae; filtered 2.5 mg/ml (C) -0.4 -0.6 -0.6 -1.3 +0.1
stress BHIS with Vancomycin 0.016 mg/ml -0.5 -0.1 -0.0 -0.7 -1.4
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen +0.1 -0.2 -0.4 -0.9 -1.2
phage SJC12_cps8_0.1MOI -0.9 -0.1 +0.2 -0.7 -1.1
stress Varel_Bryant_medium_Glucose with Sulfamethizole 0.1 mM +0.1 -0.6 -0.3 -0.1 -1.7
carbon source Mannan from Saccharomyces cerevisiae; autoclaved 2.5 mg/ml (C) -0.3 -0.3 -0.8 -1.1 +0.2
stress BHIS with Simvastatin 30 uM +0.2 +0.2 +0.3 +0.4 -3.5
carbon source (+)-Arabinogalactan; autoclaved 2.5 mg/ml (C) -0.2 -0.3 +0.3 -1.7 -0.4
stress Varel_Bryant_medium_Glucose with Chlorpromazine 0.1 mM -0.5 -0.9 -1.1 -0.3 +0.6
phage HNL05_cps7_0.1MOI -0.4 -0.6 +0.3 -0.0 -1.4
stress Varel_Bryant_medium_Glucose with Chenodeoxycholic 0.5 mg/ml -0.4 -0.5 -0.4 -1.2 +0.3
carbon source L-Rhamnose (C) -1.0 -0.2 +0.3 -1.2 +0.1
stress BHIS with Paraquat dichloride 0.1 mg/ml -0.9 +0.0 +0.5 -1.4 -0.3
phage DAC16_cps7_10MOI -0.6 +0.3 +0.3 -0.1 -1.6
mouse_post_colonization Post-colonization (Day 12) - Cage5;Mouse2 +0.1 -0.2 +0.0 +0.6 -2.3
phage SJC16_cps8_1MOI -1.0 -0.5 +0.2 -0.6 +0.5
stress BHIS with Doxycycline hyclate 0.0001953125 mM +0.2 +0.4 -0.1 +0.4 -1.6
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen +0.1 -0.5 -0.3 -1.0 +1.2
phage SJC16_cps8_10MOI -0.9 +0.3 +0.3 -0.5 +1.4
stress BHIS with Fusidic 0.004 mg/ml +0.3 +0.3 +0.4 +0.9 -1.1
stress BHIS with Fusidic 0.002 mg/ml +0.6 +0.3 +0.4 +1.1 -1.2
mouse Post-colonization (Day 7) - Cage1A;Mouse1 +0.6 -0.9 -0.2 +1.1 +1.2
mouse Post-colonization (Day 7) - Cage1B;Mouse5 +0.8 +0.0 +0.5 +1.1 +0.9
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