Fitness for 5 genes in Bacteroides thetaiotaomicron VPI-5482

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500 ntBT2619 and BT2620 are separated by 681 nucleotidesBT2620 and BT2621 are separated by 25 nucleotidesBT2621 and BT2622 are separated by 8 nucleotidesBT2622 and BT2623 are separated by 96 nucleotides BT2619: BT2619 - two-component system sensor histidine kinase (NCBI ptt file), at 3,259,854 to 3,262,226 BT2619 BT2620: BT2620 - alpha-glucosidase (NCBI ptt file), at 3,262,908 to 3,264,857 BT2620 BT2621: BT2621 - hypothetical protein (NCBI ptt file), at 3,264,883 to 3,266,193 BT2621 BT2622: BT2622 - alpha-glucuronidase (NCBI ptt file), at 3,266,202 to 3,268,370 BT2622 BT2623: BT2623 - putative alpha-1,6-mannanase (NCBI ptt file), at 3,268,467 to 3,270,020 BT2623
Group Condition BT2619 BT2620 BT2621 BT2622 BT2623
stress BHIS with Doxycycline hyclate 0.0001953125 mM -0.1 -1.0 -0.2 -0.3 -0.2
stress BHIS with Doxycycline hyclate 0.000390625 mM -0.6 -0.5 +0.1 -0.3 -0.3
stress Varel_Bryant_medium_Glucose with Doxycycline hyclate 0.0001953125 mM -0.2 -0.9 -0.2 -0.0 -0.1
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_DTT_NaS_noNitrogen -0.3 -0.0 -0.5 -0.2 -0.5
stress BHIS with Cephalothin 0.1 mM -0.7 -0.3 -0.2 -0.2 -0.0
stress BHIS with Doxycycline hyclate 0.00009765625 mM -0.0 -0.6 -0.4 -0.3 -0.1
stress Varel_Bryant_medium_Glucose with Doxycycline hyclate 0.0001953125 mM -0.3 -0.6 -0.1 -0.2 -0.0
stress BHIS with Chenodeoxycholic 0.25 mg/ml -0.3 -0.1 -0.2 -0.6 -0.1
stress Varel_Bryant_medium_Glucose with Econazole nitrate salt 0.025 mM -0.1 -0.2 +0.1 -0.2 -0.7
stress BHIS with Oxytetracycline 0.000390625 mM -0.2 -0.5 -0.1 -0.2 -0.0
stress Varel_Bryant_medium_Glucose with Chlorpromazine 0.1 mM -0.5 -0.6 +0.2 -0.2 +0.0
carbon source Heparin from porcine intestinal mucosa (C) -0.3 -0.3 -0.4 +0.2 -0.2
phage SJC12_cps8_0.1MOI -0.4 -0.5 +0.1 +0.1 -0.1
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen +0.3 -0.3 -0.0 -0.3 -0.2
stress Varel_Bryant_medium_Glucose with Trimethoprim 0.025 mM -0.5 -0.3 +0.2 -0.1 +0.3
stress BHIS with Chlorpromazine 0.1 mM -0.5 -0.1 +0.4 -0.2 +0.1
mouse_post_colonization Post-colonization (Day 10) - Cage3;Mouse1 -0.4 -0.3 +0.2 +0.0 +0.2
stress BHIS with Thioridazine 0.025 mM -0.3 -0.1 +0.4 -0.3 +0.2
stress BHIS with 5-Fluorouracil 0.1 mM -0.5 -0.0 +0.4 +0.2 +0.4
stress BHIS with Simvastatin 30 uM +0.4 -0.1 +0.4 -0.1 +0.2
mouse_post_colonization Post-colonization (Day 12) - Cage7;Mouse1 +0.2 -0.2 +0.4 +0.2 +0.2
mouse Post-colonization (Day 7) - Cage1B;Mouse5 +0.3 +0.1 -0.1 +0.2 +0.4
mouse_peg_treatment PEG (Day 2) - Cage5;Mouse1 -0.0 -0.1 +0.4 +0.3 +0.3
mouse_peg_treatment PEG (Day 2) - Cage4;Mouse1 -0.1 -0.0 +0.5 +0.1 +0.6
carbon source Mannan from Saccharomyces cerevisiae; filtered 2.5 mg/ml (C) +0.2 +0.1 +0.0 +0.4 +0.3
mouse_peg_treatment PEG (Day 3) - Cage2;Mouse1 +0.2 +0.0 +0.5 -0.0 +0.5
stress BHIS with Benzethonium chloride 0.002 mM +0.2 -0.0 +0.3 +0.4 +0.3
carbon source Mannan from Saccharomyces cerevisiae (C) +0.4 +0.1 +0.2 +0.3 +0.3
carbon source Mannan from Saccharomyces cerevisiae; filtered 2.5 mg/ml (C) +0.3 +0.2 +0.1 +0.4 +0.4
stress BHIS with Doxycycline hyclate 0.0001953125 mM -0.1 +0.2 +0.5 +0.7 +0.5
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