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Cofit
Protein
Homologs
Fitness for 5 genes in
Bacteroides thetaiotaomicron VPI-5482
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
BT2525 and BT2526 are separated by 169 nucleotides
BT2526 and BT2527 are separated by 201 nucleotides
BT2527 and BT2528 are separated by 87 nucleotides
BT2528 and BT2529 are separated by 360 nucleotides
BT2525: BT2525 - cephalosporin-C deacetylase (NCBI ptt file), at 3,154,308 to 3,155,666
BT2525
BT2526: BT2526 - hypothetical protein (NCBI ptt file), at 3,155,836 to 3,156,234
BT2526
BT2527: BT2527 - uridine kinase (uridine monophosphokinase) (NCBI ptt file), at 3,156,436 to 3,158,109
BT2527
BT2528: BT2528 - putative Na+-dependent phosphate transporter (NCBI ptt file), at 3,158,197 to 3,159,894
BT2528
BT2529: BT2529 - conserved hypothetical protein (NCBI ptt file), at 3,160,255 to 3,161,325
BT2529
Group
Condition
BT2525
BT2526
BT2527
BT2528
BT2529
carbon source
D-Arabinose (C)
+0.1
-0.5
-2.7
N.D.
-0.2
carbon source
D-Glucose (C)
+0.0
-0.2
-2.5
N.D.
-0.2
carbon source
D-Galacturonic Acid (C)
-0.2
-0.4
-1.9
N.D.
-0.2
carbon source
a-Cyclodextrin (C)
+0.0
-0.5
-2.2
N.D.
-0.0
carbon source
D-Galacturonic Acid (C)
+0.1
-0.4
-2.0
N.D.
-0.5
carbon source
D-Trehalose (C)
+0.2
-0.2
-2.3
N.D.
-0.3
carbon source
D-Glucosamine Hydrochloride (C)
+0.2
-0.2
-2.3
N.D.
-0.3
carbon source
Beta-Lactose (C)
+0.1
-0.1
-2.3
N.D.
-0.1
carbon source
D-Maltose (C)
+0.2
-0.5
-2.1
N.D.
-0.1
carbon source
D-Glucose (C)
+0.1
-0.3
-2.0
N.D.
-0.2
carbon source
D-Fructose (C)
+0.2
-0.5
-1.8
N.D.
-0.2
carbon source
D-Xylose (C)
-0.0
+0.1
-2.1
N.D.
-0.2
carbon source
Rhamnogalacturonan - from potato (C)
-0.1
-0.3
-1.5
N.D.
-0.3
carbon source
L-Arabinose (C)
+0.0
-0.3
-1.8
N.D.
-0.1
carbon source
L-Fucose (C)
-0.3
-0.1
-1.8
N.D.
+0.0
carbon source
NAG (C)
+0.0
-0.0
-1.9
N.D.
-0.1
carbon source
D-Mannose (C)
+0.1
+0.0
-1.9
N.D.
-0.1
carbon source
D-Glucose (C)
+0.2
+0.1
-2.2
N.D.
+0.0
carbon source
D-Raffinose (C)
+0.2
-0.5
-1.5
N.D.
-0.1
carbon source
D-Galactose (C)
+0.2
-0.1
-1.8
N.D.
+0.0
phage
SJC16_cps8_1MOI
-0.7
-0.6
+0.4
N.D.
-0.6
carbon source
D-Ribose (C)
-0.6
+0.3
-1.3
N.D.
+0.0
stress
BHIS with Dimethyl Sulfoxide 10 vol%
-0.2
+0.5
-1.2
N.D.
+0.5
stress
BHIS with Doxycycline hyclate 0.0001953125 mM
+0.4
-1.4
+0.7
N.D.
+0.0
stress
BHIS with Chlorpromazine 0.1 mM
-0.4
-0.5
+1.1
N.D.
+0.4
stress
Varel_Bryant_medium_Glucose with Chlorpromazine 0.1 mM
-0.2
+0.2
+1.3
N.D.
+0.5
stress
BHIS with Chlorpromazine 0.2 mM
-0.3
+0.2
+1.5
N.D.
+0.5
carbon source
Hyaluronic from Streptococcus equi (C)
-0.1
+2.2
+0.0
N.D.
+0.1
carbon source
Hyaluronic from Streptococcus equi
+0.5
+3.2
+0.2
N.D.
-0.4
carbon source
Hyaluronic from Streptococcus equi
+0.1
+3.6
+0.1
N.D.
+0.1
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