Fitness for 5 genes in Bacteroides thetaiotaomicron VPI-5482

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500 ntBT2421 and BT2422 are separated by 92 nucleotidesBT2422 and BT2423 are separated by 115 nucleotidesBT2423 and BT2424 are separated by 16 nucleotidesBT2424 and BT2425 are separated by 18 nucleotides BT2421: BT2421 - FrrC, osmosensitive K+ channel histidine kinase (NCBI ptt file), at 3,023,900 to 3,025,033 BT2421 BT2422: BT2422 - conserved hypothetical protein (NCBI ptt file), at 3,025,126 to 3,025,872 BT2422 BT2423: BT2423 - K+-transporting ATPase C chain (NCBI ptt file), at 3,025,988 to 3,026,557 BT2423 BT2424: BT2424 - K+-transporting ATPase B chain (NCBI ptt file), at 3,026,574 to 3,028,607 BT2424 BT2425: BT2425 - K+-transporting ATPase A chain (NCBI ptt file), at 3,028,626 to 3,030,332 BT2425
Group Condition BT2421 BT2422 BT2423 BT2424 BT2425
stress Varel_Bryant_medium_Glucose with Trimethoprim 0.025 mM +0.0 -0.4 -0.8 -0.7 +0.3
carbon source L-Rhamnose (C) -0.7 -0.1 -0.7 +0.3 +0.4
stress BHIS with 5-Fluorouracil 0.1 mM -0.7 +0.1 -1.4 +0.4 +0.8
stress BHIS with Trimethoprim 0.0125 mM -0.5 -0.2 -0.9 +0.2 +0.8
stress BHIS with Trimethoprim 0.00625 mM -0.5 -0.2 -1.0 +0.5 +0.5
stress BHIS with 5-Fluorouracil 0.1 mM -0.6 +0.2 -1.4 +0.5 +0.6
stress BHIS with Trimethoprim 0.00625 mM -0.7 +0.1 -1.2 +0.6 +0.7
control NoPhage -0.8 +0.4 -0.4 +0.3 +0.4
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen -0.9 -0.1 +0.9 -0.2 +0.3
stress BHIS with 5-Fluorouracil 0.2 mM -0.5 +0.4 -1.2 +0.8 +0.9
stress BHIS with Doxycycline hyclate 0.0001953125 mM -0.6 +0.0 +0.4 -0.3 +1.3
stress BHIS with Thioridazine 0.0125 mM +0.1 +0.3 -0.7 +0.4 +0.8
mouse_peg_treatment PEG (Day 3) - Cage3;Mouse2 -0.1 +0.4 +1.0 -0.6 +0.3
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen -0.7 +0.7 +0.5 +0.3 +0.6
stress BHIS with Fusidic 0.004 mg/ml +0.0 -0.2 +0.2 +0.1 +1.6
stress BHIS with Chlorpromazine 0.1 mM -0.1 +0.5 +0.2 +0.9 +0.5
stress BHIS with Zinc Pyrithione 0.05 mM -0.1 +0.8 +0.5 +0.2 +0.7
mouse_post_colonization Post-colonization (Day 4) - Cage6;Mouse1 -0.1 +0.2 +0.5 +0.9 +0.8
mouse_peg_treatment PEG (Day 1) - Cage4;Mouse1 +0.6 +0.3 +1.1 +0.3 +0.1
stress BHIS with Chlorpromazine 0.2 mM -0.1 +0.7 +0.4 +0.7 +0.7
stress BHIS with Thioridazine 0.025 mM +0.2 +0.8 -0.3 +0.7 +0.9
mouse_post_colonization Post-colonization (Day 4) - Cage1;Mouse2 -0.3 +0.1 +0.7 +1.1 +0.9
mouse_peg_treatment PEG (Day 2) - Cage4;Mouse1 +0.6 +0.8 +1.1 -0.0 +0.0
nitrogen source L-aspartic (N) +0.3 +0.3 +1.5 +0.3 +0.2
mouse_post_colonization Post-colonization (Day 3) - Cage1;Mouse2 +0.1 +0.4 +0.5 +0.9 +0.7
stress BHIS with Zinc Pyrithione 0.05 mM +0.1 +0.9 +0.8 +0.3 +1.0
mouse_post_colonization Post-colonization (Day 10) - Cage3;Mouse1 +0.0 +0.4 +1.2 +0.8 +0.7
mouse_post_colonization Post-colonization (Day 2) - Cage5;Mouse1 +0.3 +0.4 +1.0 +1.0 +1.0
mouse_post_colonization Post-colonization (Day 3) - Cage4;Mouse3 +0.1 +0.5 +0.9 +1.4 +1.2
stress BHIS with sodium fluoride 30 mM +0.0 -0.1 +1.0 +1.4 +4.4
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