Fitness for 5 genes in Bacteroides thetaiotaomicron VPI-5482

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500 ntBT2401 and BT2402 overlap by 4 nucleotidesBT2402 and BT2403 are separated by 15 nucleotidesBT2403 and BT2404 are separated by 454 nucleotidesBT2404 and BT2405 are separated by 101 nucleotides BT2401: BT2401 - threonine synthase (NCBI ptt file), at 2,996,511 to 2,997,812 BT2401 BT2402: BT2402 - phosphoglycerate mutase (NCBI ptt file), at 2,997,809 to 2,999,032 BT2402 BT2403: BT2403 - aspartate kinase / homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) (from data), at 2,999,048 to 3,001,483 BT2403 BT2404: BT2404 - L-asparaginase I (NCBI ptt file), at 3,001,938 to 3,002,921 BT2404 BT2405: BT2405 - conserved hypothetical protein (NCBI ptt file), at 3,003,023 to 3,004,222 BT2405
Group Condition BT2401 BT2402 BT2403 BT2404 BT2405
carbon source L-Arabinose (C) -4.7 -5.5 -5.8 -0.3 -0.2
carbon source NAG (C) -4.9 -5.6 -5.9 +0.0 -0.1
stress Varel_Bryant_medium_Glucose with Chenodeoxycholic 0.25 mg/ml -5.7 -5.9 -5.2 +0.3 +0.0
carbon source a-Cyclodextrin (C) -4.8 -5.2 -6.0 +0.1 -0.2
carbon source D-Xylose (C) -5.5 -5.0 -5.5 +0.2 -0.0
carbon source D-Raffinose (C) -4.9 -5.4 -5.7 +0.3 -0.1
stress Varel_Bryant_medium_Glucose with Deoxycholic 0.075 mg/ml -5.3 -5.6 -5.1 +0.4 -0.1
carbon source D-Arabinose (C) -4.6 -5.4 -5.3 -0.2 -0.1
pH Varel_Bryant_medium_Glucose; pH 7 -5.0 -5.5 -5.0 +0.0 -0.1
carbon source L-Rhamnose (C) -4.9 -5.0 -5.9 +0.1 +0.2
carbon source D-Glucose (C) -5.1 -4.9 -5.3 +0.0 -0.2
carbon source D-Fructose (C) -5.0 -4.9 -5.2 +0.1 -0.3
stress Varel_Bryant_medium_Glucose with Chenodeoxycholic 0.5 mg/ml -4.9 -5.6 -5.0 +0.2 -0.0
stress Varel_Bryant_medium_Glucose with Lithocholic 0.2 mg/ml -5.5 -4.9 -4.9 +0.0 +0.1
varel_bryant_medium_glucose Varel_Bryant_medium_Glucose -5.0 -5.5 -4.9 +0.3 -0.0
carbon source D-Glucosamine Hydrochloride (C) -4.9 -4.5 -5.3 -0.1 -0.2
stress Varel_Bryant_medium_Glucose with Indolicidin 0.002 mg/ml -4.8 -5.0 -4.5 -0.1 -0.7
stress Varel_Bryant_medium_Glucose with Chenodeoxycholic 0.125 mg/ml -5.3 -5.3 -4.8 +0.3 -0.1
stress Varel_Bryant_medium_Glucose with Chenodeoxycholic 0.25 mg/ml -5.3 -5.2 -4.9 +0.2 +0.2
stress Varel_Bryant_medium_Glucose with Deoxycholic 0.1 mg/ml -5.3 -5.4 -4.8 +0.5 +0.1
stress Varel_Bryant_medium_Glucose with Deoxycholic 0.1 mg/ml -5.2 -5.3 -4.6 +0.3 -0.1
carbon source L-Rhamnose (C) -5.1 -4.8 -5.4 +0.1 +0.4
stress Varel_Bryant_medium_Glucose with Chenodeoxycholic 0.125 mg/ml -5.3 -5.3 -4.5 +0.2 +0.1
stress Varel_Bryant_medium_Glucose with Ethanol 3.33 vol% -4.8 -5.4 -4.6 +0.4 -0.1
stress Varel_Bryant_medium_Glucose with Ethanol 3.33 vol% -4.8 -5.3 -4.7 +0.4 -0.0
stress Varel_Bryant_medium_Glucose with Deoxycholic 0.075 mg/ml -5.1 -5.2 -4.6 +0.4 +0.2
stress Varel_Bryant_medium_Glucose with Lithocholic 0.2 mg/ml -5.0 -5.2 -4.6 +0.3 +0.1
carbon source D-Xylose (C) -4.9 -4.8 -5.1 +0.5 +0.1
stress Varel_Bryant_medium_Glucose with Deoxycholic 0.2 mg/ml -4.8 -5.1 -4.9 +0.4 +0.3
stress Varel_Bryant_medium_Glucose with Deoxycholic 0.2 mg/ml -4.8 -5.3 -4.5 +0.4 +0.3
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