Fitness for 5 genes in Bacteroides thetaiotaomicron VPI-5482

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BT2333	BT2334	BT2335	BT2336	BT2337
mouse	Post-colonization (Day 7) - Cage1B;Mouse5	-0.2	-1.1	-0.4	-0.5	-0.5
stress	BHIS with Doxycycline hyclate 0.000390625 mM	-0.1	-1.0	-0.2	-1.1	-0.5
carbon source	D-Trehalose 20mM (C)	+0.1	-0.7	-0.8	-0.5	-0.7
stress	BHIS with Oxytetracycline 0.000390625 mM	-0.4	-1.0	-0.3	-0.4	-0.4
carbon source	Red Arabinan from sugar-beet	-0.1	-1.1	-0.3	+0.0	-0.9
mouse_post_colonization	Post-colonization (Day 8) - Cage6;Mouse2	-0.5	-0.7	+0.1	-0.7	-0.4
carbon source	Hyaluronic from Streptococcus equi	-0.5	-0.6	+0.3	-1.3	+0.1
stress	Varel_Bryant_medium_Glucose with Dimetridazole 0.025 mM	+0.2	+0.3	-1.2	-0.8	-0.4
mouse_peg_treatment	PEG (Day 2) - Cage3;Mouse3	-0.4	-0.1	+0.5	-0.9	-0.9
mouse_peg_treatment	PEG (Day 2) - Cage4;Mouse1	-0.0	-0.4	+0.8	-1.1	-0.4
mouse_post_colonization	Post-colonization (Day 6) - Cage6;Mouse2	-0.4	+0.5	+0.3	-1.2	-0.3
mouse_post_colonization	Post-colonization (Day 1) - Cage6;Mouse1	-0.1	-0.6	+0.4	+0.5	-1.1
mouse_post_colonization	Post-colonization (Day 12) - Cage7;Mouse3	+0.1	-0.4	+0.9	-0.9	-0.5
mouse_post_colonization	Post-colonization (Day 14) - Cage7;Mouse3	-0.3	-0.2	+0.8	-1.1	+0.1
nitrogen source	L-Glutamine (N); Varel_Bryant_medium_Glucose_DTT_NaS_noNitrogen	-0.1	+0.8	+0.1	+0.1	-1.3
mouse_peg_treatment	PEG (Day 3) - Cage1;Mouse2	-0.1	-0.2	+1.2	-0.4	-0.8
mouse_coculture	cage1; mouse1; day3; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003	+0.3	+1.0	-0.5	-0.9	-0.1
stress	BHIS with Sulfaquinoxaline 0.1 mM	-0.2	+0.9	+0.3	-0.6	-0.6
nitrogen source	L-Asparagine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen	-0.4	+0.6	+0.4	+0.1	-0.8
mouse_post_colonization	Post-colonization (Day 10) - Cage7;Mouse2	-0.2	+0.9	+0.4	-0.2	-0.7
mouse_post_colonization	Post-colonization (Day 12) - Cage5;Mouse3	+0.5	+0.3	+0.6	-0.8	-0.3
mouse_post_colonization	Post-colonization (Day 14) - Cage4;Mouse4	-0.2	+0.6	+0.8	-1.0	+0.0
mouse_coculture	cage1; mouse1; day5; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003	+0.4	+0.9	-0.2	-0.7	+0.2
stress	BHIS with Doxycycline hyclate 0.0001953125 mM	+0.6	+1.0	-0.3	-0.5	-0.1
phage	DAC15 _cps3_0.1MOI	+0.2	+1.0	+0.7	-0.4	-0.4
stress	Varel_Bryant_medium_Glucose with Bile salts 0.5 mg/mL; pH 7	-0.7	+0.4	+0.1	+0.6	+0.7
mouse_post_colonization	Post-colonization (Day 10) - Cage6;Mouse2	+0.5	+0.8	+0.7	-0.8	+0.2
mouse_peg_treatment	PEG (Day 3) - Cage2;Mouse1	+0.6	+0.5	+0.5	-0.4	+0.4
phage	HNL05_cps7_0.1MOI	+0.3	+0.3	+1.0	+0.5	-0.4
nitrogen source	L-Serine (N); Varel_Bryant_medium_Glucose_DTT_noNitrogen	-0.3	+1.3	+0.3	+0.4	+0.2