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Protein
Homologs
Fitness for 5 genes in
Bacteroides thetaiotaomicron VPI-5482
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
BT2322 and BT2323 are separated by 697 nucleotides
BT2323 and BT2324 are separated by 26 nucleotides
BT2324 and BT2325 are separated by 38 nucleotides
BT2325 and BT2326 overlap by 11 nucleotides
BT2322: BT2322 - putative integrase (NCBI ptt file), at 2,897,656 to 2,898,654
BT2322
BT2323: BT2323 - conserved hypothetical protein (NCBI ptt file), at 2,899,352 to 2,900,680
BT2323
BT2324: BT2324 - DNA topoisomerase III (NCBI ptt file), at 2,900,707 to 2,902,806
BT2324
BT2325: BT2325 - hypothetical protein (NCBI ptt file), at 2,902,845 to 2,903,312
BT2325
BT2326: BT2326 - putative DNA methylase (NCBI ptt file), at 2,903,302 to 2,909,028
BT2326
Group
Condition
BT2322
BT2323
BT2324
BT2325
BT2326
phage
SJC16_cps8_1MOI
-0.8
-0.7
-0.1
-1.7
-0.3
phage
DAC16_cps7_0.1MOI
-0.6
-2.2
-0.1
-0.6
+0.1
phage
SJC12_cps8_0.1MOI
-0.4
-1.1
+0.1
-1.4
-0.1
phage
HNL05_cps7_0.1MOI
-0.4
-1.7
-0.6
-0.2
+0.1
phage
DAC19_cps8_0.1MOI
-0.5
-1.7
-0.1
-0.6
+0.1
stress
BHIS with Chlorpromazine 0.2 mM
-0.6
-1.2
-0.1
-0.9
+0.1
phage
SJC12_cps8_0.1MOI
-0.4
-1.6
-0.1
-0.5
-0.1
stress
BHIS with Ceftriaxone hemi(heptahydrate) 0.2 mM
-0.3
-1.1
-0.3
-0.4
-0.3
stress
BHIS with Trimethoprim 0.00625 mM
-0.7
-1.1
+0.0
-0.7
+0.0
survival
aerobic shaking 48 hr copy B
-0.3
-0.8
-0.8
-0.3
-0.2
mouse_coculture
cage1; mouse1; day5; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003
-0.8
-1.0
-0.3
-0.4
+0.1
phage
DAC15 _cps3_0.1MOI
-0.6
-1.3
-0.2
-0.4
+0.2
phage
DAC20_cps8_1MOI
-0.6
-1.1
-0.2
-0.4
-0.0
stress
BHIS with Thioridazine 0.0125 mM
-0.5
-0.2
-0.2
-1.3
-0.1
stress
BHIS with Ceftazidime 0.5 mg/ml
-0.1
-1.8
+0.3
-0.5
-0.0
stress
BHIS with Trimethoprim 0.0125 mM
-0.6
-1.2
+0.0
-0.6
+0.1
mouse_coculture
cage1; mouse3; day5; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003
-0.9
-0.8
+0.1
-0.4
+0.0
control
NoPhage
-0.4
-0.9
+0.3
-0.9
-0.1
carbon source
D-Xylose (C)
-0.1
-0.9
+0.2
-1.2
-0.0
control
NoPhage
-0.4
-1.0
+0.2
-0.4
-0.2
phage
SJC16_cps8_10MOI
-0.4
-1.3
+0.3
-1.1
+0.6
stress
BHIS with 5-Fluorouracil 0.2 mM
-0.6
-1.0
+0.0
-0.5
+0.3
phage
DAC22_cps8_0.1MOI
-0.3
-1.2
+0.1
-0.5
+0.2
mouse_post_colonization
Post-colonization (Day 12) - Cage5;Mouse4
-0.1
-1.5
-0.3
+0.3
-0.1
stress
BHIS with Cefoxitin 0.025 mM
-0.5
+0.6
-0.5
-0.8
-0.3
carbon source
Heparin from porcine intestinal mucosa (C)
-0.4
+0.8
+0.3
-0.8
-0.1
mouse_peg_treatment
PEG (Day 3) - Cage3;Mouse2
-0.2
+0.9
-0.5
+0.5
-0.3
carbon source
Mannan from Saccharomyces cerevisiae (C)
+0.5
+0.8
+0.2
+0.6
-0.3
carbon source
Mannan from Saccharomyces cerevisiae (C)
+0.4
+0.8
+0.5
+1.0
+0.0
stress
BHIS with Chloride 350 mM
+0.7
+1.2
+0.1
+0.6
+0.2
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