Fitness for 5 genes in Bacteroides thetaiotaomicron VPI-5482

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500 ntBT2297 and BT2298 are separated by 623 nucleotidesBT2298 and BT2299 overlap by 16 nucleotidesBT2299 and BT2300 are separated by 31 nucleotidesBT2300 and BT2301 are separated by 145 nucleotides BT2297: BT2297 - putative reverse transcriptase (NCBI ptt file), at 2,871,211 to 2,872,869 BT2297 BT2298: BT2298 - conserved protein found in conjugate transposon (NCBI ptt file), at 2,873,493 to 2,875,520 BT2298 BT2299: BT2299 - conserved protein found in conjugate transposon (NCBI ptt file), at 2,875,505 to 2,875,840 BT2299 BT2300: BT2300 - conserved protein found in conjugate transposon (NCBI ptt file), at 2,875,872 to 2,876,171 BT2300 BT2301: BT2301 - conserved protein found in conjugate transposon (NCBI ptt file), at 2,876,317 to 2,877,039 BT2301
Group Condition BT2297 BT2298 BT2299 BT2300 BT2301
carbon source D-Trehalose (C) -0.2 +0.0 -2.9 -0.3 N.D.
stress Varel_Bryant_medium_Glucose with Dimetridazole 0.0015625 mM -0.2 -0.1 -2.3 -0.7 N.D.
stress BHIS with Oxytetracycline 0.000390625 mM -0.5 -0.3 -1.8 -0.7 N.D.
stress Varel_Bryant_medium_Glucose with Dimethyl Sulfoxide 0.2 vol% -0.7 -0.2 -1.3 -1.0 N.D.
carbon source D-Mannose (C) -0.4 +0.2 -3.2 +0.0 N.D.
stress Varel_Bryant_medium_Glucose with Bile salts 0.5 mg/mL; pH 7 -0.7 +0.2 -2.2 -0.5 N.D.
stress BHIS with Rifampicin 0.0000244140625 mM -1.1 -0.2 -1.3 -0.6 N.D.
stress Varel_Bryant_medium_Glucose with Furaltadone 0.05 mM -0.4 -0.1 -1.5 -1.1 N.D.
stress BHIS with Dimethyl Sulfoxide 0.2 vol% -0.3 -0.2 -2.4 +0.0 N.D.
carbon source Beta-Lactose (C) +0.2 +0.1 -3.6 +0.4 N.D.
stress BHIS with Chlorhexidine diacetate salt 0.0015625 mM -0.4 +0.1 -1.9 -0.7 N.D.
stress BHIS with Chlorpromazine 0.1 mM -0.3 +0.1 -2.4 -0.2 N.D.
carbon source Laminaribiose (C) -0.8 -0.0 -2.4 +0.4 N.D.
carbon source Rhamnogalacturonan - from potato (C) -0.5 -0.3 -2.2 +0.2 N.D.
phage SJC16_cps8_1MOI +0.2 -0.0 -1.4 -1.4 N.D.
stress BHIS with Dimetridazole 0.0125 mM -0.7 +0.2 -1.8 -0.2 N.D.
mouse Post-colonization (Day 7) - Cage1A;Mouse1 -1.4 +0.1 -1.4 +0.0 N.D.
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen +0.2 -0.3 -0.2 -2.2 N.D.
stress BHIS with Chenodeoxycholic 0.25 mg/ml -1.1 -0.3 -1.9 +1.1 N.D.
carbon source Laminaribiose (C) -0.6 -0.0 -2.2 +0.7 N.D.
mouse_peg_treatment PEG (Day 1) - Cage4;Mouse1 -0.6 +0.6 -1.3 -0.9 N.D.
carbon source D-Glucosamine Hydrochloride (C) +0.3 -0.2 -2.3 +0.3 N.D.
stress BHIS with Lithocholic 0.4 mg/ml -0.9 -0.4 -1.8 +1.2 N.D.
stress BHIS with Chenodeoxycholic 0.25 mg/ml -0.4 -0.5 -1.4 +0.9 N.D.
carbon source D-Maltose (C) -0.3 +0.3 -1.9 +0.5 N.D.
phage SJC12_cps8_0.1MOI +0.2 -0.1 +0.7 -2.2 N.D.
carbon source Red Arabinan from sugar-beet (C) +0.3 +0.2 -2.1 +0.6 N.D.
stress BHIS with Paraquat dichloride 0.1 mg/ml +0.6 +0.3 +1.3 -2.3 N.D.
stress BHIS with Paraquat dichloride 0.1 mg/ml +0.8 +0.4 +0.8 -2.0 N.D.
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen +0.4 +0.3 +2.2 -0.7 N.D.
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