Fitness for 5 genes in Bacteroides thetaiotaomicron VPI-5482

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500 ntBT2278 and BT2279 are separated by 101 nucleotidesBT2279 and BT2280 are separated by 1 nucleotidesBT2280 and BT2281 are separated by 186 nucleotidesBT2281 and BT2282 are separated by 757 nucleotides BT2278: BT2278 - conserved hypothetical protein (NCBI ptt file), at 2,859,158 to 2,859,571 BT2278 BT2279: BT2279 - putative ribose phosphate pyrophosphokinase (NCBI ptt file), at 2,859,673 to 2,860,593 BT2279 BT2280: BT2280 - hypothetical protein (NCBI ptt file), at 2,860,595 to 2,860,969 BT2280 BT2281: BT2281 - hypothetical protein (NCBI ptt file), at 2,861,156 to 2,861,428 BT2281 BT2282: BT2282 - conserved hypothetical protein (NCBI ptt file), at 2,862,186 to 2,862,758 BT2282
Group Condition BT2278 BT2279 BT2280 BT2281 BT2282
carbon source Hyaluronic from Streptococcus equi -0.5 -0.4 -0.5 -2.5 -0.2
stress BHIS with Chenodeoxycholic 0.25 mg/ml +0.1 -0.1 -2.3 -0.4 -1.3
carbon source D-Raffinose (C) +0.4 +0.0 -1.1 -3.4 +0.1
stress BHIS with Dimethyl Sulfoxide 10 vol% +0.1 +0.6 -1.3 -2.5 -0.5
carbon source Red Arabinan from sugar-beet (C) -0.1 +0.0 -1.8 -1.8 +0.2
stress BHIS with Dimethyl Sulfoxide 9 vol% +0.7 +0.4 -0.5 -2.5 -0.6
stress BHIS with Chloride 350 mM +0.2 +0.4 -0.8 -2.7 +0.7
survival aerobic shaking 48 hr copy B -1.4 +0.3 -1.1 +1.1 -0.7
phage HNL05_cps7_0.1MOI +0.1 -0.3 -1.1 +1.2 -1.4
phage SJC25_Acapsular_0.1MOI -0.2 -0.3 -1.8 +1.6 -0.4
stress BHIS with Lincomycin 0.0015625 mM -0.3 -0.0 +1.3 -1.0 -1.2
stress BHIS with Chlorpromazine 0.1 mM -0.3 -0.6 -1.8 +2.4 -0.8
mouse_post_colonization Post-colonization (Day 10) - Cage4;Mouse5 -0.6 +0.2 -1.7 +0.9 +0.4
stress Varel_Bryant_medium_Glucose with Chlorpromazine 0.1 mM +0.5 -0.1 -2.6 +1.7 -0.3
control NoPhage -0.7 -0.3 -0.7 +1.5 -0.5
stress BHIS with Trimethoprim 15 uM -0.5 -0.0 -1.3 +1.8 -0.4
stress BHIS with Dimethyl Sulfoxide 9 vol% +0.1 +0.5 +0.6 -2.2 +0.7
stress BHIS with Trimethoprim 0.00625 mM -0.3 -0.1 -0.4 +2.7 -1.4
stress BHIS with 5-Fluorouracil 0.1 mM -0.6 -0.6 -0.2 +3.0 -0.2
stress BHIS with Trimethoprim 0.0125 mM -0.5 -0.2 +0.5 +2.4 -0.6
stress BHIS with 5-Fluorouracil 0.2 mM -0.6 -0.5 +0.3 +2.7 -0.2
stress BHIS with Sulfamonomethoxine 0.1 mM -0.6 -0.4 +1.1 +1.6 +0.2
stress Varel_Bryant_medium_Glucose with Doxycycline hyclate 0.0001953125 mM +0.1 -0.1 -0.8 +2.8 -0.2
stress BHIS with 5-Fluorouracil 0.1 mM -0.4 -0.1 +0.1 +3.1 -0.6
stress BHIS with Sulfaquinoxaline 0.1 mM -0.4 -0.2 +0.6 +2.5 -0.2
stress BHIS with Sulfamonomethoxine 0.2 mM -0.4 -0.3 +1.1 +1.8 +0.1
stress BHIS with Thioridazine 0.0125 mM +0.3 -0.4 +1.0 +2.4 -0.2
stress BHIS with Thioridazine 0.025 mM +0.2 -0.3 +0.3 +3.4 +0.0
stress BHIS with Thioridazine 0.0125 mM -0.2 -0.3 +1.0 +3.6 -0.3
stress BHIS with Cefoxitin 0.025 mM +0.2 -0.5 -0.3 +5.0 -0.6
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