Fitness for 5 genes in Bacteroides thetaiotaomicron VPI-5482

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500 ntBT2208 and BT2209 are separated by 75 nucleotidesBT2209 and BT2210 overlap by 17 nucleotidesBT2210 and BT2211 overlap by 6 nucleotidesBT2211 and BT2212 are separated by 59 nucleotides BT2208: BT2208 - hypothetical protein (NCBI ptt file), at 2,777,839 to 2,778,063 BT2208 BT2209: BT2209 - putative nucleotidyltransferase (NCBI ptt file), at 2,778,139 to 2,778,432 BT2209 BT2210: BT2210 - conserved hypothetical protein (NCBI ptt file), at 2,778,416 to 2,778,793 BT2210 BT2211: BT2211 - conserved hypothetical protein (NCBI ptt file), at 2,778,788 to 2,780,098 BT2211 BT2212: BT2212 - magnesium chelatase, subunit I, putative ATPase (NCBI ptt file), at 2,780,158 to 2,781,132 BT2212
Group Condition BT2208 BT2209 BT2210 BT2211 BT2212
carbon source (+)-Arabinogalactan (C) -1.7 N.D. -1.1 +0.1 -0.5
carbon source Mannan from Saccharomyces cerevisiae (C) -0.8 N.D. -0.3 -0.5 -0.6
stress Varel_Bryant_medium_Glucose with Ramoplanin 0.0015625 mM -1.3 N.D. +0.1 -0.6 -0.2
carbon source Mannan from Saccharomyces cerevisiae; autoclaved 2.5 mg/ml (C) -0.7 N.D. +0.3 -0.7 -0.9
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_DTT_noNitrogen -1.7 N.D. -0.0 -0.4 +0.1
stress Varel_Bryant_medium_Glucose with Sulfaquinoxaline 0.1 mM -0.9 N.D. +0.2 +0.1 -0.9
stress Varel_Bryant_medium_Glucose with Dimetridazole 0.025 mM -1.1 N.D. +0.2 +0.1 -0.6
stress BHIS with Simvastatin 30 uM -0.8 N.D. -0.7 +0.5 -0.2
nitrogen source L-aspartic (N) -1.1 N.D. +0.2 +0.3 -0.5
stress BHIS with Doxycycline hyclate 0.0001953125 mM -1.4 N.D. -0.5 +0.3 +0.6
carbon source D-Glucose (C) -1.9 N.D. +0.9 +0.0 +0.0
carbon source D-Glucosamine Hydrochloride (C) -1.4 N.D. +0.8 -0.1 -0.0
nitrogen source Cytidine (N) -1.1 N.D. +0.7 +0.4 -0.3
stress BHIS with Doxycycline hyclate 0.000390625 mM -1.4 N.D. +0.7 +0.2 +0.2
stress Varel_Bryant_medium_Glucose with Anhydrotetracycline 0.0125 mM +1.0 N.D. -0.4 -0.4 -0.3
stress BHIS with Chlorpromazine 0.2 mM +1.6 N.D. -0.9 -0.3 -0.0
stress Varel_Bryant_medium_Glucose with Zinc Pyrithione 0.05 mM +1.4 N.D. +0.5 -0.6 -0.3
stress BHIS with Chlorpromazine 0.1 mM +1.8 N.D. -0.5 +0.0 -0.3
stress Varel_Bryant_medium_Glucose with Chlorpromazine 0.1 mM +0.8 N.D. +1.0 -0.4 -0.2
mouse_coculture cage1; mouse1; day3; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 +1.4 N.D. -0.3 -0.1 +0.3
carbon source amylopectin from maize; autoclaved 2.5 mg/ml (C) +1.1 N.D. +0.5 +0.2 -0.4
stress BHIS with Sulfamonomethoxine 0.1 mM +1.1 N.D. -0.4 +0.2 +0.4
stress BHIS with 5-Fluorouracil 0.2 mM +1.3 N.D. -0.5 +0.6 +0.1
mouse_post_colonization Post-colonization (Day 8) - Cage6;Mouse2 +0.6 N.D. +1.0 -0.3 +0.2
mouse_post_colonization Post-colonization (Day 14) - Cage7;Mouse3 +1.0 N.D. +0.1 +0.5 +0.5
stress BHIS with Thioridazine 0.025 mM +1.8 N.D. +0.1 +0.2 -0.0
stress BHIS with Thioridazine 0.0125 mM +1.6 N.D. -0.0 +0.6 +0.1
stress BHIS with Trimethoprim 0.00625 mM +1.5 N.D. +0.1 +0.1 +0.7
stress BHIS with 5-Fluorouracil 0.1 mM +1.2 N.D. +0.3 +0.5 +0.5
stress BHIS with Trimethoprim 0.0125 mM +1.3 N.D. -0.1 +1.0 +0.6
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