Fitness for 5 genes in Bacteroides thetaiotaomicron VPI-5482

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500 ntBT2045 and BT2046 are separated by 374 nucleotidesBT2046 and BT2047 are separated by 37 nucleotidesBT2047 and BT2048 are separated by 4 nucleotidesBT2048 and BT2049 are separated by 19 nucleotides BT2045: BT2045 - hypothetical protein (NCBI ptt file), at 2,566,995 to 2,567,309 BT2045 BT2046: BT2046 - putative cardiolipin synthetase (NCBI ptt file), at 2,567,684 to 2,568,880 BT2046 BT2047: BT2047 - thymidylate synthase (NCBI ptt file), at 2,568,918 to 2,569,712 BT2047 BT2048: BT2048 - dihydrofolate reductase (NCBI ptt file), at 2,569,717 to 2,570,211 BT2048 BT2049: BT2049 - transcriptional regulator (NCBI ptt file), at 2,570,231 to 2,570,710 BT2049
Group Condition BT2045 BT2046 BT2047 BT2048 BT2049
carbon source D-Galactose (C) -0.8 -6.6 N.D. N.D. -3.1
carbon source D-Glucose (C) -1.1 -6.6 N.D. N.D. -1.8
carbon source Beta-Lactose (C) -0.9 -6.5 N.D. N.D. -1.9
carbon source D-Fructose (C) -0.3 -6.7 N.D. N.D. -2.0
carbon source a-Cyclodextrin (C) -0.8 -6.7 N.D. N.D. -1.5
carbon source D-Galacturonic Acid (C) -0.9 -6.8 N.D. N.D. -1.1
carbon source D-Glucosamine Hydrochloride (C) -0.7 -6.4 N.D. N.D. -1.5
carbon source D-Mannose (C) -1.3 -5.5 N.D. N.D. -1.4
carbon source L-Arabinose (C) -0.1 -6.8 N.D. N.D. -0.7
carbon source L-Fucose (C) +0.0 -6.8 N.D. N.D. -0.7
carbon source D-Glucose (C) +0.3 -6.6 N.D. N.D. -1.0
carbon source D-Maltose (C) +0.5 -6.6 N.D. N.D. -1.2
carbon source D-Trehalose (C) -0.3 -5.3 N.D. N.D. -1.5
carbon source NAG (C) +0.0 -6.6 N.D. N.D. -0.5
carbon source L-Rhamnose (C) +0.3 -7.0 N.D. N.D. +0.2
carbon source D-Raffinose (C) -0.5 -4.8 N.D. N.D. -1.2
carbon source D-Glucose (C) +0.9 -5.7 N.D. N.D. -1.3
carbon source D-Galacturonic Acid (C) +0.1 -5.0 N.D. N.D. -1.2
carbon source L-Fucose (C) +0.3 -5.9 N.D. N.D. -0.5
carbon source D-Glucose (C) -0.3 -4.9 N.D. N.D. -0.8
nitrogen source Glycine (N) -3.8 +0.4 N.D. N.D. -2.4
carbon source D-Xylose (C) +0.4 -5.7 N.D. N.D. -0.3
carbon source D-Arabinose (C) +0.4 -4.8 N.D. N.D. -0.6
stress BHIS with perchlorate 100 mM -3.2 -0.9 N.D. N.D. -0.9
mouse_coculture cage1; mouse2; day4; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 +0.8 -1.6 N.D. N.D. -3.7
mouse_coculture cage1; mouse1; day4; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 +0.6 -1.6 N.D. N.D. -3.5
mouse_coculture cage1; mouse3; day2; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 +0.8 -0.9 N.D. N.D. -4.3
mouse_coculture cage1; mouse3; day4; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 +0.7 -1.6 N.D. N.D. -3.2
mouse_post_colonization Post-colonization (Day 14) - Cage7;Mouse3 -2.9 +1.4 N.D. N.D. -0.8
carbon source D-Ribose (C) +1.0 -2.9 N.D. N.D. +1.8
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