Fitness for 5 genes in Bacteroides thetaiotaomicron VPI-5482

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500 ntBT1797 and BT1798 are separated by 211 nucleotidesBT1798 and BT1799 are separated by 39 nucleotidesBT1799 and BT1800 are separated by 243 nucleotidesBT1800 and BT1801 overlap by 4 nucleotides BT1797: BT1797 - putative transcriptional regulator (NCBI ptt file), at 2,248,924 to 2,249,814 BT1797 BT1798: BT1798 - hypothetical protein (NCBI ptt file), at 2,250,026 to 2,251,372 BT1798 BT1799: BT1799 - putative vitamin B12 receptor precursor (NCBI ptt file), at 2,251,412 to 2,254,261 BT1799 BT1800: BT1800 - putative two-component system sensor histidine kinase (NCBI ptt file), at 2,254,505 to 2,256,355 BT1800 BT1801: BT1801 - two-component system sensor histidine kinase (NCBI ptt file), at 2,256,352 to 2,258,313 BT1801
Group Condition BT1797 BT1798 BT1799 BT1800 BT1801
carbon source Mannan from Saccharomyces cerevisiae; autoclaved 2.5 mg/ml (C) -0.9 -0.1 +0.0 -0.3 -0.2
carbon source Mannan from Saccharomyces cerevisiae; autoclaved 2.5 mg/ml (C) -0.7 -0.3 +0.2 -0.2 +0.0
carbon source Mannan from Saccharomyces cerevisiae (C) -0.6 -0.6 +0.3 -0.1 +0.0
stress Varel_Bryant_medium_Glucose with Sulfamethizole 0.1 mM -0.5 -0.4 +0.2 +0.1 -0.3
carbon source Mannan from Saccharomyces cerevisiae; filtered 2.5 mg/ml (C) -0.6 -0.4 +0.2 -0.3 +0.3
stress BHIS with Paraquat dichloride 0.1 mg/ml -0.7 -0.2 +0.1 -0.1 +0.3
carbon source (+)-Arabinogalactan; autoclaved 2.5 mg/ml (C) -0.6 -0.3 -0.1 +0.3 +0.2
stress Varel_Bryant_medium_Glucose with Bile salts 0.5 mg/mL; pH 7 +0.4 -0.3 -0.1 +0.1 -0.6
stress BHIS with Thioridazine 0.0125 mM -0.8 -0.2 -0.1 +0.1 +0.5
stress Varel_Bryant_medium_Glucose with Chlorhexidine diacetate salt 0.003125 mM -0.2 -0.7 +0.2 -0.0 +0.3
stress BHIS with Dimetridazole 0.025 mM -0.0 -0.9 +0.2 +0.4 +0.1
phage HNL05_cps7_0.1MOI -0.8 -0.2 +0.2 -0.1 +0.6
carbon source (+)-Arabinogalactan; autoclaved 2.5 mg/ml (C) -0.8 +0.4 +0.1 -0.2 +0.2
stress BHIS with Chenodeoxycholic 0.25 mg/ml +0.5 -0.0 +0.2 -0.0 -0.9
carbon source L-Rhamnose (C) -0.7 +0.2 -0.1 -0.2 +0.5
carbon source Mannan from Saccharomyces cerevisiae; filtered 2.5 mg/ml (C) -0.5 -0.4 +0.3 -0.2 +0.6
phage SJC12_cps8_0.1MOI -0.2 -0.7 -0.1 +0.3 +0.6
phage HNL05_cps7_1MOI -0.5 -0.2 +0.1 +0.3 +0.3
carbon source 1,4-B-D-Galactobiose (C) -0.5 +0.2 +0.3 +0.3 -0.2
phage SJC15_cps8_1MOI +0.1 -0.7 +0.1 -0.0 +0.6
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen -0.2 -0.5 -0.0 +0.3 +0.5
stress BHIS with Lithocholic 0.4 mg/ml +0.7 -0.2 +0.3 -0.2 -0.3
stress BHIS with Thioridazine 0.025 mM -0.5 +0.0 +0.2 +0.2 +0.6
mouse_post_colonization Post-colonization (Day 8) - Cage6;Mouse2 -0.3 +0.1 +0.5 -0.2 +0.4
phage SJC16_cps8_1MOI -0.1 -0.1 +0.2 +0.3 +0.7
stress BHIS with Fusidic 0.002 mg/ml +0.6 +0.2 +0.3 +0.3 -0.2
mouse_peg_treatment PEG (Day 3) - Cage2;Mouse1 +0.3 +0.5 +0.2 +0.0 +0.5
phage DAC20_cps8_1MOI +0.2 +0.3 +0.1 +0.3 +0.8
phage DAC19_cps8_1MOI +0.1 +0.5 +0.4 +0.3 +0.3
phage DAC23_cps8_10MOI +0.5 +0.4 +0.5 +0.0 +0.3
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