Fitness for 5 genes in Bacteroides thetaiotaomicron VPI-5482

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500 ntBT1683 and BT1684 are separated by 248 nucleotidesBT1684 and BT1685 are separated by 173 nucleotidesBT1685 and BT1686 are separated by 30 nucleotidesBT1686 and BT1687 are separated by 31 nucleotides BT1683: BT1683 - putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file), at 2,075,866 to 2,079,060 BT1683 BT1684: BT1684 - conserved hypothetical protein (NCBI ptt file), at 2,079,309 to 2,080,307 BT1684 BT1685: BT1685 - lactoylglutathione lyase and related protein (NCBI ptt file), at 2,080,481 to 2,080,885 BT1685 BT1686: BT1686 - propionyl-CoA carboxylase beta chain (NCBI ptt file), at 2,080,916 to 2,082,469 BT1686 BT1687: BT1687 - hypothetical protein (NCBI ptt file), at 2,082,501 to 2,083,421 BT1687
Group Condition BT1683 BT1684 BT1685 BT1686 BT1687
mouse_peg_treatment PEG (Day 1) - Cage4;Mouse1 +0.1 -2.6 N.D. N.D. N.D.
mouse Post-colonization (Day 7) - Cage1A;Mouse1 -0.0 -2.4 N.D. N.D. N.D.
mouse_post_colonization Post-colonization (Day 12) - Cage3;Mouse4 -0.1 -2.1 N.D. N.D. N.D.
carbon source D-Galacturonic Acid (C) -0.1 -2.1 N.D. N.D. N.D.
stress Varel_Bryant_medium_Glucose with Indolicidin 0.002 mg/ml +0.1 -2.2 N.D. N.D. N.D.
nitrogen source D-Glucosamine Hydrochloride (N) -0.2 -1.9 N.D. N.D. N.D.
mouse_peg_treatment PEG (Day 1 ) - Cage1;Mouse5 -0.1 -1.8 N.D. N.D. N.D.
stress Thallium(I) acetate 0.025 mg/ml +0.1 -1.9 N.D. N.D. N.D.
mouse Post-colonization (Day 4) - Cage1B;Mouse4 -0.1 -1.8 N.D. N.D. N.D.
mouse_post_colonization Post-colonization (Day 10) - Cage5;Mouse2 -0.2 -1.6 N.D. N.D. N.D.
stress copper (II) chloride 0.05 mM -0.2 -1.6 N.D. N.D. N.D.
stress Varel_Bryant_medium_Glucose with Deoxycholic 0.075 mg/ml -0.1 -1.7 N.D. N.D. N.D.
mouse Post-colonization (Day 7) - Cage1B;Mouse5 -0.0 -1.8 N.D. N.D. N.D.
mouse_peg_treatment PEG (Day 3) - Cage2;Mouse1 -0.2 -1.6 N.D. N.D. N.D.
mouse Post-colonization (Day 7) - Cage1C;Mouse2 -0.2 -1.6 N.D. N.D. N.D.
carbon source (+)-Arabinogalactan (C) +0.0 -1.8 N.D. N.D. N.D.
survival aerobic shaking 48 hr copy B -0.0 -1.6 N.D. N.D. N.D.
carbon source (+)-Arabinogalactan; autoclaved 5 mg/ml (C) -0.2 -1.4 N.D. N.D. N.D.
survival aerobic shaking 48 hr copy A -0.1 -1.5 N.D. N.D. N.D.
stress Thallium(I) acetate 0.01 mg/ml +0.0 -1.6 N.D. N.D. N.D.
nitrogen source L-Valine (N) +0.1 -1.6 N.D. N.D. N.D.
nitrogen source N-Acetyl-D-glucosamine (N) +0.1 -1.5 N.D. N.D. N.D.
mouse Post-colonization (Day 4) - Cage1C;Mouse1 +0.1 -1.5 N.D. N.D. N.D.
carbon source Starch soluble; autoclaved 2.5 mg/ml (C) +0.1 -1.5 N.D. N.D. N.D.
mouse_post_colonization Post-colonization (Day 14) - Cage7;Mouse3 +0.1 -1.6 N.D. N.D. N.D.
mouse_post_colonization Post-colonization (Day 14) - Cage5;Mouse1 +0.2 -1.5 N.D. N.D. N.D.
mouse_post_colonization Post-colonization (Day 1) - Cage3;Mouse1 +0.3 +1.5 N.D. N.D. N.D.
stress BHIS with Simvastatin 30 uM -0.0 +2.0 N.D. N.D. N.D.
stress BHIS with Simvastatin 30 uM -0.0 +2.2 N.D. N.D. N.D.
stress BHIS with Simvastatin 30 uM -0.0 +2.8 N.D. N.D. N.D.
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