Fitness for 5 genes in Bacteroides thetaiotaomicron VPI-5482

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500 ntBT1423 and BT1424 are separated by 25 nucleotidesBT1424 and BT1425 are separated by 254 nucleotidesBT1425 and BT1426 are separated by 72 nucleotidesBT1426 and BT1427 are separated by 170 nucleotides BT1423: BT1423 - conserved hypothetical protein (NCBI ptt file), at 1,756,198 to 1,756,584 BT1423 BT1424: BT1424 - hypothetical protein (NCBI ptt file), at 1,756,610 to 1,757,227 BT1424 BT1425: BT1425 - conserved hypothetical protein (NCBI ptt file), at 1,757,482 to 1,758,180 BT1425 BT1426: BT1426 - conserved hypothetical protein (NCBI ptt file), at 1,758,253 to 1,758,783 BT1426 BT1427: BT1427 - tetracycline resistance element mobilization regulatory protein rteC (NCBI ptt file), at 1,758,954 to 1,759,793 BT1427
Group Condition BT1423 BT1424 BT1425 BT1426 BT1427
carbon source Hyaluronic from Streptococcus equi -0.1 -1.5 -1.0 -1.1 -0.2
phage SJC16_cps8_10MOI -0.5 -1.6 +0.2 -0.4 -1.0
stress BHIS with Sulfamonomethoxine 0.2 mM -0.1 -1.6 -0.7 +0.4 +0.1
stress BHIS with Sulfamonomethoxine 0.1 mM +0.6 -1.2 -0.3 +0.2 -0.8
stress Varel_Bryant_medium_Glucose with Sulfamonomethoxine 0.2 mM +0.4 -0.5 +0.4 -0.8 -1.0
stress BHIS with Simvastatin 30 uM -0.1 -0.0 +0.1 -2.0 +0.6
carbon source Maltitol 20mM (C) +0.5 -0.3 -0.8 -1.1 +0.4
stress BHIS with Fusidic 0.002 mg/ml +0.2 +0.6 -0.7 -0.1 -1.1
phage DAC23_cps8_0.1MOI +0.5 -0.6 -0.2 -1.0 +0.4
phage ARB14_cps1_0.1MOI +0.3 -1.2 +0.7 +0.1 -0.8
carbon source Mannan from Saccharomyces cerevisiae; filtered 2.5 mg/ml (C) -1.6 +0.1 +0.4 -0.2 +0.3
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen +1.2 -1.0 -0.2 -1.0 +0.5
mouse_post_colonization Post-colonization (Day 1) - Cage2;Mouse2 -1.0 +0.5 +1.3 -0.9 -0.1
carbon source amylopectin from maize (C) -0.7 +0.5 -0.4 -0.3 +0.8
stress BHIS with Trimethoprim 15 uM +0.6 -0.5 +0.7 +0.2 -1.0
mouse_post_colonization Post-colonization (Day 8) - Cage6;Mouse2 +0.5 +0.4 -1.6 +0.1 +1.0
stress BHIS with Sulfaquinoxaline 0.1 mM +0.4 -1.1 -0.2 +1.2 +0.1
carbon source Red Arabinan from sugar-beet (C) -0.4 +0.5 +0.3 -0.6 +0.8
stress Varel_Bryant_medium_Glucose with Trimethoprim 0.025 mM +0.8 -0.2 +0.6 +0.5 -1.1
stress BHIS with Cephalothin 0.2 mM +0.6 -0.5 +0.2 +1.0 -0.4
stress BHIS with Thioridazine 0.025 mM +0.3 -0.9 +0.6 -0.5 +1.3
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen +1.5 -0.3 -0.2 +0.4 -0.3
stress Varel_Bryant_medium_Glucose with Chlorpromazine 0.1 mM -0.5 +0.7 +1.5 -0.4 -0.0
stress BHIS with Cefoxitin 0.025 mM +0.1 -0.7 +1.1 -0.0 +0.9
stress Varel_Bryant_medium_Glucose with Econazole nitrate salt 0.025 mM +0.7 -0.5 +0.8 +0.6 +0.2
mouse_post_colonization Post-colonization (Day 14) - Cage2;Mouse2 -0.5 +0.7 +0.3 +1.1 +0.5
stress BHIS with Doxycycline hyclate 0.000390625 mM +0.8 +0.4 -0.3 +1.1 +0.5
stress Varel_Bryant_medium_Glucose with Dimethyl Sulfoxide 0.2 vol% +0.4 +0.6 +0.3 +0.8 +0.5
mouse_post_colonization Post-colonization (Day 1) - Cage6;Mouse2 +0.8 +0.5 +0.1 +0.8 +0.6
mouse_post_colonization Post-colonization (Day 10) - Cage5;Mouse2 +0.4 +0.9 -0.1 +1.3 +1.0
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