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Protein
Homologs
Fitness for 5 genes in
Bacteroides thetaiotaomicron VPI-5482
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
BT1423 and BT1424 are separated by 25 nucleotides
BT1424 and BT1425 are separated by 254 nucleotides
BT1425 and BT1426 are separated by 72 nucleotides
BT1426 and BT1427 are separated by 170 nucleotides
BT1423: BT1423 - conserved hypothetical protein (NCBI ptt file), at 1,756,198 to 1,756,584
BT1423
BT1424: BT1424 - hypothetical protein (NCBI ptt file), at 1,756,610 to 1,757,227
BT1424
BT1425: BT1425 - conserved hypothetical protein (NCBI ptt file), at 1,757,482 to 1,758,180
BT1425
BT1426: BT1426 - conserved hypothetical protein (NCBI ptt file), at 1,758,253 to 1,758,783
BT1426
BT1427: BT1427 - tetracycline resistance element mobilization regulatory protein rteC (NCBI ptt file), at 1,758,954 to 1,759,793
BT1427
Group
Condition
BT1423
BT1424
BT1425
BT1426
BT1427
carbon source
Hyaluronic from Streptococcus equi
-0.1
-1.5
-1.0
-1.1
-0.2
phage
SJC16_cps8_10MOI
-0.5
-1.6
+0.2
-0.4
-1.0
stress
BHIS with Sulfamonomethoxine 0.2 mM
-0.1
-1.6
-0.7
+0.4
+0.1
stress
BHIS with Sulfamonomethoxine 0.1 mM
+0.6
-1.2
-0.3
+0.2
-0.8
stress
Varel_Bryant_medium_Glucose with Sulfamonomethoxine 0.2 mM
+0.4
-0.5
+0.4
-0.8
-1.0
stress
BHIS with Simvastatin 30 uM
-0.1
-0.0
+0.1
-2.0
+0.6
carbon source
Maltitol 20mM (C)
+0.5
-0.3
-0.8
-1.1
+0.4
stress
BHIS with Fusidic 0.002 mg/ml
+0.2
+0.6
-0.7
-0.1
-1.1
phage
DAC23_cps8_0.1MOI
+0.5
-0.6
-0.2
-1.0
+0.4
phage
ARB14_cps1_0.1MOI
+0.3
-1.2
+0.7
+0.1
-0.8
carbon source
Mannan from Saccharomyces cerevisiae; filtered 2.5 mg/ml (C)
-1.6
+0.1
+0.4
-0.2
+0.3
nitrogen source
L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen
+1.2
-1.0
-0.2
-1.0
+0.5
mouse_post_colonization
Post-colonization (Day 1) - Cage2;Mouse2
-1.0
+0.5
+1.3
-0.9
-0.1
carbon source
amylopectin from maize (C)
-0.7
+0.5
-0.4
-0.3
+0.8
stress
BHIS with Trimethoprim 15 uM
+0.6
-0.5
+0.7
+0.2
-1.0
mouse_post_colonization
Post-colonization (Day 8) - Cage6;Mouse2
+0.5
+0.4
-1.6
+0.1
+1.0
stress
BHIS with Sulfaquinoxaline 0.1 mM
+0.4
-1.1
-0.2
+1.2
+0.1
carbon source
Red Arabinan from sugar-beet (C)
-0.4
+0.5
+0.3
-0.6
+0.8
stress
Varel_Bryant_medium_Glucose with Trimethoprim 0.025 mM
+0.8
-0.2
+0.6
+0.5
-1.1
stress
BHIS with Cephalothin 0.2 mM
+0.6
-0.5
+0.2
+1.0
-0.4
stress
BHIS with Thioridazine 0.025 mM
+0.3
-0.9
+0.6
-0.5
+1.3
nitrogen source
L-Asparagine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen
+1.5
-0.3
-0.2
+0.4
-0.3
stress
Varel_Bryant_medium_Glucose with Chlorpromazine 0.1 mM
-0.5
+0.7
+1.5
-0.4
-0.0
stress
BHIS with Cefoxitin 0.025 mM
+0.1
-0.7
+1.1
-0.0
+0.9
stress
Varel_Bryant_medium_Glucose with Econazole nitrate salt 0.025 mM
+0.7
-0.5
+0.8
+0.6
+0.2
mouse_post_colonization
Post-colonization (Day 14) - Cage2;Mouse2
-0.5
+0.7
+0.3
+1.1
+0.5
stress
BHIS with Doxycycline hyclate 0.000390625 mM
+0.8
+0.4
-0.3
+1.1
+0.5
stress
Varel_Bryant_medium_Glucose with Dimethyl Sulfoxide 0.2 vol%
+0.4
+0.6
+0.3
+0.8
+0.5
mouse_post_colonization
Post-colonization (Day 1) - Cage6;Mouse2
+0.8
+0.5
+0.1
+0.8
+0.6
mouse_post_colonization
Post-colonization (Day 10) - Cage5;Mouse2
+0.4
+0.9
-0.1
+1.3
+1.0
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