Fitness for 5 genes in Bacteroides thetaiotaomicron VPI-5482

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500 ntBT1331 and BT1332 are separated by 6 nucleotidesBT1332 and BT1333 are separated by 15 nucleotidesBT1333 and BT1334 are separated by 110 nucleotidesBT1334 and BT1335 are separated by 131 nucleotides BT1331: BT1331 - hypothetical protein (NCBI ptt file), at 1,656,605 to 1,657,084 BT1331 BT1332: BT1332 - conserved hypothetical protein (NCBI ptt file), at 1,657,091 to 1,657,765 BT1332 BT1333: BT1333 - putative dihydropyrimidine dehydrogenase [NADP+] precursor (NCBI ptt file), at 1,657,781 to 1,658,761 BT1333 BT1334: BT1334 - PhoH-like protein (NCBI ptt file), at 1,658,872 to 1,660,197 BT1334 BT1335: BT1335 - folylpolyglutamate synthase (NCBI ptt file), at 1,660,329 to 1,661,804 BT1335
Group Condition BT1331 BT1332 BT1333 BT1334 BT1335
stress BHIS with Lomefloxacin 0.025 mM -3.4 -0.5 -0.2 +0.2 N.D.
stress BHIS with Lomefloxacin 0.025 mM -3.0 -0.5 -0.1 +0.1 N.D.
stress BHIS with Dimetridazole 0.025 mM -1.1 -1.5 -0.1 -0.2 N.D.
carbon source Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C) -0.3 -1.4 -0.0 -1.0 N.D.
stress BHIS with Dimetridazole 0.025 mM -0.9 -1.6 -0.4 +0.2 N.D.
stress BHIS with Ciprofloxacin Hydrochloride 0.025 mM -1.6 -0.2 -0.6 -0.2 N.D.
mouse Post-colonization (Day 4) - Cage1C;Mouse1 -0.5 -0.3 -0.0 -1.6 N.D.
stress BHIS with Dimetridazole 0.0125 mM -1.2 -0.4 -0.5 -0.3 N.D.
mouse Post-colonization (Day 7) - Cage1A;Mouse1 -0.7 +0.0 -0.2 -1.5 N.D.
stress Varel_Bryant_medium_Glucose with Zinc Pyrithione 0.025 mM -0.7 -1.7 +0.1 +0.0 N.D.
carbon source D-Arabinose (C) -0.6 -0.0 +0.2 -1.6 N.D.
carbon source L-Arabinose (C) -0.5 -0.6 +0.3 -1.3 N.D.
stress Varel_Bryant_medium_Glucose with Chlorpromazine 0.1 mM -0.7 -1.5 +0.2 +0.2 N.D.
stress Varel_Bryant_medium_Glucose with Dimetridazole 0.025 mM -1.2 -0.3 +0.4 -0.4 N.D.
mouse_post_colonization Post-colonization (Day 12) - Cage7;Mouse1 -0.9 +0.4 +0.0 -0.9 N.D.
mouse_post_colonization Post-colonization (Day 14) - Cage5;Mouse4 -0.3 -0.5 +0.5 -1.2 N.D.
mouse Post-dosage t1 (Day 1) - Cage1C;Mouse1 -0.1 +0.3 +0.2 -1.8 N.D.
carbon source D-Raffinose (C) +0.5 -0.2 +0.1 -1.6 N.D.
mouse Post-colonization (Day 7) - Cage1C;Mouse1 -0.2 +0.7 -0.0 -1.7 N.D.
stress BHIS with Dimethyl Sulfoxide 9 vol% -1.5 +0.7 -0.5 +0.1 N.D.
stress Varel_Bryant_medium_Glucose with Doxycycline hyclate 0.0001953125 mM -0.6 -1.2 +0.3 +0.5 N.D.
mouse_post_colonization Post-colonization (Day 10) - Cage5;Mouse3 -0.8 +0.6 +0.1 -0.9 N.D.
stress BHIS with Dimethyl Sulfoxide 10 vol% -1.2 +0.9 -0.3 -0.0 N.D.
stress BHIS with Thioridazine 0.0125 mM -1.0 -0.4 +0.5 +0.4 N.D.
stress BHIS with 5-Fluorouracil 0.1 mM -1.5 +0.7 +0.1 +0.3 N.D.
stress BHIS with Simvastatin 30 uM -0.7 -0.4 +0.2 +1.0 N.D.
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen -0.6 -0.9 +0.9 +1.2 N.D.
stress BHIS with Simvastatin 30 uM -0.4 +0.5 -0.3 +1.2 N.D.
survival aerobic shaking 48 hr copy A -0.7 -0.3 +0.5 +2.0 N.D.
survival aerobic shaking 48 hr copy B -1.1 +0.3 +0.2 +2.7 N.D.
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