Fitness for 5 genes in Bacteroides thetaiotaomicron VPI-5482

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BT1143	BT1144	BT1145	BT1146	BT1147
mouse	Post-colonization (Day 7) - Cage1A;Mouse1	-1.1	-0.1	-2.7	-1.8	-0.3
mouse_peg_treatment	PEG (Day 1) - Cage3;Mouse1	-2.2	-0.1	-2.3	-0.3	-0.4
mouse_post_colonization	Post-colonization (Day 12) - Cage1;Mouse3	-1.8	-0.1	-1.7	-0.9	-0.4
stress	BHIS with Cephalothin 0.2 mM	-2.1	-0.9	-2.0	+0.8	-0.3
mouse_peg_treatment	PEG (Day 2) - Cage3;Mouse3	-0.9	-0.1	-2.6	-0.3	-0.6
mouse_post_colonization	Post-colonization (Day 14) - Cage2;Mouse2	-0.4	-0.4	-1.6	-1.3	-0.7
mouse_post_colonization	Post-colonization (Day 10) - Cage3;Mouse4	-0.1	-0.1	-1.7	-2.3	-0.2
mouse_post_colonization	Post-colonization (Day 10) - Cage4;Mouse1	-0.5	-0.2	-2.6	-0.7	-0.2
mouse_post_colonization	Post-colonization (Day 10) - Cage4;Mouse5	-0.7	-0.2	-1.7	-2.0	+0.4
mouse_post_colonization	Post-colonization (Day 12) - Cage5;Mouse3	-0.6	-0.5	-1.7	-1.2	-0.3
mouse_peg_treatment	PEG (Day 1) - Cage2;Mouse1	+0.5	-0.4	-2.6	-1.3	-0.4
mouse_peg_treatment	PEG (Day 3) - Cage3;Mouse2	-2.5	+0.3	-0.5	-1.0	-0.4
carbon source	Hyaluronic from Streptococcus equi (C)	-0.5	-0.4	-3.0	+0.1	-0.3
mouse	Post-dosage t1 (Day 1) - Cage1C;Mouse1	-1.0	-0.5	-2.1	+0.2	-0.4
nitrogen source	Glycine (N)	+0.3	-1.0	-0.9	-1.2	-1.0
mouse_post_colonization	Post-colonization (Day 1) - Cage6;Mouse2	-3.2	+0.4	-0.2	-0.7	+0.0
carbon source	amylopectin from maize	+0.2	+0.3	-2.8	-1.0	+0.1
stress	BHIS with Doxycycline hyclate 0.000390625 mM	-3.7	+0.9	-0.1	-0.1	-0.1
mouse	Post-colonization (Day 4) - Cage1C;Mouse3	-0.6	-0.0	-2.8	+1.0	-0.4
mouse_coculture	cage1; mouse3; day2; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003	-0.8	-0.2	-2.4	+0.8	-0.1
stress	Varel_Bryant_medium_Glucose with Phenazine ethosulfate 0.1 mM	-1.9	+0.8	-0.7	+0.6	+0.3
mouse_post_colonization	Post-colonization (Day 8) - Cage1;Mouse5	+1.2	+0.2	-2.2	+0.7	+0.5
carbon source	Amylopectin from Potato; autoclaved 2.5 mg/ml (C)	-0.8	+0.5	+1.3	+1.2	+0.4
carbon source	D-Arabinose (C)	+0.6	+0.6	+2.1	+0.6	+0.4
stress	Varel_Bryant_medium_Glucose with Bile salts 0.5 mg/mL; pH 7	+0.6	+0.9	+0.5	+2.2	+0.3
carbon source	Mannan from Saccharomyces cerevisiae; filtered 2.5 mg/ml (C)	+0.3	+0.4	+1.4	+2.4	+0.6
stress	Varel_Bryant medium with Chlorpromazine 0.05 mM	+0.2	+1.0	+2.4	+1.4	+0.5
carbon source	(+)-Arabinogalactan; autoclaved 2.5 mg/ml (C)	+0.3	+0.6	+1.8	+2.7	+0.4
carbon source	Mannan from Saccharomyces cerevisiae; autoclaved 2.5 mg/ml (C)	+0.4	+1.0	+2.2	+2.3	+0.7
carbon source	Mannan from Saccharomyces cerevisiae; autoclaved 2.5 mg/ml (C)	+0.9	+0.6	+2.2	+2.7	+0.4