Fitness for 5 genes in Bacteroides thetaiotaomicron VPI-5482

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BT1063	BT1064	BT1065	BT1066	BT1067
stress	Varel_Bryant_medium_Glucose with Bile salts 0.5 mg/mL; pH 7	-0.2	-0.4	-1.5	-0.4	-0.4
mouse_post_colonization	Post-colonization (Day 8) - Cage6;Mouse2	-0.0	-0.8	-1.9	-0.3	+0.1
phage	SJC16_cps8_1MOI	-0.5	-0.4	-1.3	+0.0	-0.7
stress	Varel_Bryant_medium_Glucose with Sulfamethizole 0.1 mM	-0.6	-0.4	+0.3	-1.8	+0.1
mouse_post_colonization	Post-colonization (Day 14) - Cage2;Mouse2	+0.2	-0.9	-1.2	-0.0	-0.2
carbon source	Red Arabinan from sugar-beet (C)	+0.2	-0.4	-1.2	-0.6	-0.0
stress	BHIS with Fusidic 0.002 mg/ml	+0.4	+0.4	-2.0	-0.4	-0.5
mouse_coculture	cage1; mouse1; day5; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003	+0.2	-0.0	-0.9	-0.5	-0.8
stress	Varel_Bryant_medium_Glucose with Ramoplanin 0.0015625 mM	-0.1	-1.1	-1.0	+0.1	+0.2
carbon source	Hyaluronic from Streptococcus equi	-0.3	+0.3	-1.1	-0.3	-0.6
phage	HNL05_cps7_0.1MOI	-0.1	-1.0	-0.7	-0.9	+0.8
mouse_post_colonization	Post-colonization (Day 14) - Cage1;Mouse1	+0.3	-0.2	-1.8	+0.1	-0.3
mouse_post_colonization	Post-colonization (Day 14) - Cage4;Mouse4	+0.6	-0.5	-0.7	-0.4	-0.8
stress	BHIS with Zinc Pyrithione 0.025 mM	-0.1	-1.1	-0.6	+0.5	-0.1
mouse_peg_treatment	PEG (Day 3) - Cage2;Mouse1	+0.5	-0.6	-0.7	+0.4	-1.1
mouse_post_colonization	Post-colonization (Day 6) - Cage6;Mouse2	+0.5	-0.3	-2.0	+0.4	+0.1
nitrogen source	Glucuronamide (N)	+0.4	-0.6	-1.0	-0.4	+0.3
nitrogen source	Glucuronamide (N)	+0.2	+0.4	-1.1	-0.9	+0.2
stress	Varel_Bryant_medium_Glucose with Trimethoprim 0.0125 mM	-0.2	-1.3	+0.2	-0.3	+0.4
mouse_post_colonization	Post-colonization (Day 8) - Cage2;Mouse3	+0.4	+0.0	-1.4	+0.3	-0.4
stress	Nickel (II) chloride 0.01 mM	+0.2	+0.3	-1.7	-0.2	+0.5
survival	aerobic shaking 48 hr copy B	-0.0	+0.2	-0.3	-1.4	+0.6
mouse_post_colonization	Post-colonization (Day 8) - Cage3;Mouse2	+0.5	-0.9	-0.6	+0.3	+0.1
nitrogen source	Ammonium chloride (N)	+0.3	+0.5	-0.0	-1.5	+0.1
mouse_peg_treatment	PEG (Day 1) - Cage3;Mouse1	+0.7	-0.2	-1.1	+0.7	-0.3
phage	SJC16_cps8_10MOI	-0.3	+1.0	-0.6	-0.7	+0.5
stress	BHIS with DAMPA 60 uM	+0.3	+0.7	+0.5	-0.6	-0.3
stress	BHIS with Chlorpromazine 0.2 mM	+0.5	+0.0	+1.3	-0.5	-0.4
nitrogen source	L-Asparagine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen	-0.2	+0.9	-0.5	+1.4	+0.4
survival	aerobic shaking 48 hr copy A	+0.5	+0.7	+1.1	-0.3	+0.3