Fitness for 5 genes in Bacteroides thetaiotaomicron VPI-5482

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500 ntBT0981 and BT0982 are separated by 257 nucleotidesBT0982 and BT0983 are separated by 229 nucleotidesBT0983 and BT0984 are separated by 28 nucleotidesBT0984 and BT0985 are separated by 9 nucleotides BT0981: BT0981 - two-component system sensor histidine kinase/response regulator, hybrid ('one component system') (NCBI ptt file), at 1,200,747 to 1,205,165 BT0981 BT0982: BT0982 - hypothetical protein (NCBI ptt file), at 1,205,423 to 1,205,674 BT0982 BT0983: BT0983 - beta-galactosidase (NCBI ptt file), at 1,205,904 to 1,208,552 BT0983 BT0984: BT0984 - hypothetical protein (NCBI ptt file), at 1,208,581 to 1,210,992 BT0984 BT0985: BT0985 - putative sialic acid-specific acetylesterase II (NCBI ptt file), at 1,211,002 to 1,212,435 BT0985
Group Condition BT0981 BT0982 BT0983 BT0984 BT0985
stress BHIS with Dimethyl Sulfoxide 9 vol% -0.1 N.D. -0.6 +0.5 -2.2
carbon source Starch from potato -0.2 N.D. -0.6 -0.0 -1.5
stress Varel_Bryant_medium_Glucose with Rifampicin 0.0001953125 mM -0.3 N.D. -0.6 +0.2 -1.6
carbon source Levan - from Erwinia herbicola -0.1 N.D. -0.3 -0.3 -1.3
stress Varel_Bryant_medium_Glucose with Anhydrotetracycline 0.000390625 mM -0.1 N.D. -0.5 -0.2 -1.2
carbon source Laminaribiose (C) -0.2 N.D. -0.4 -0.7 -0.6
mouse_post_colonization Post-colonization (Day 10) - Cage5;Mouse2 +0.1 N.D. -0.4 -0.4 -1.0
stress Varel_Bryant_medium_Glucose with Thioridazine 0.025 mM -0.2 N.D. +0.3 -0.5 -1.3
mouse_post_colonization Post-colonization (Day 14) - Cage2;Mouse2 +0.2 N.D. -0.7 -0.5 -0.6
stress BHIS with Deoxycholic 0.2 mg/ml +0.3 N.D. -1.0 -0.4 -0.5
carbon source Amylose from potato -0.0 N.D. +0.2 -0.9 -0.9
mouse_post_colonization Post-colonization (Day 12) - Cage3;Mouse4 +0.3 N.D. -0.3 -0.4 -1.1
mouse_post_colonization Post-colonization (Day 12) - Cage2;Mouse1 -0.2 N.D. +0.3 -0.9 -0.4
stress BHIS with Dimethyl Sulfoxide 0.2 vol% +0.2 N.D. +0.2 -0.6 -0.9
stress BHIS with Simvastatin 30 uM +0.1 N.D. +0.3 -0.1 -1.5
stress Varel_Bryant_medium_Glucose with Bile salts 0.5 mg/mL; pH 7 +0.1 N.D. +0.2 +0.2 -1.5
carbon source amylopectin from maize +0.1 N.D. +0.6 -0.3 -1.2
stress Varel_Bryant_medium_Glucose with Irgasan 0.025 mM -0.4 N.D. +0.7 -0.7 -0.2
carbon source (+)-Arabinogalactan (C) +0.2 N.D. +0.8 -0.4 -1.2
stress BHIS with Trimethoprim 0.00625 mM -0.1 N.D. -0.5 -0.5 +0.9
stress BHIS with Cephalothin 0.1 mM +0.0 N.D. -0.9 +0.0 +0.9
stress BHIS with Sulfamonomethoxine 0.2 mM +0.2 N.D. +0.1 -0.8 +0.9
mouse_post_colonization Post-colonization (Day 10) - Cage1;Mouse2 +0.2 N.D. -0.6 -0.1 +0.9
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen +0.4 N.D. +0.9 -0.2 -0.6
stress Varel_Bryant_medium_Glucose with Trimethoprim 0.0125 mM -0.2 N.D. +0.8 -0.5 +0.4
stress Varel_Bryant_medium_Glucose with Sulfamethizole 0.2 mM -0.2 N.D. +0.7 -0.5 +0.6
mouse_post_colonization Post-colonization (Day 2) - Cage2;Mouse3 -0.3 N.D. -0.3 +0.4 +0.9
mouse_post_colonization Post-colonization (Day 1) - Cage6;Mouse1 +0.5 N.D. -0.3 +0.8 +0.4
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_DTT_noNitrogen +0.1 N.D. +0.6 -0.3 +1.2
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen +0.3 N.D. +0.4 +0.3 +0.9
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