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Protein
Homologs
Fitness for 5 genes in
Bacteroides thetaiotaomicron VPI-5482
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
BT0946 and BT0947 are separated by 55 nucleotides
BT0947 and BT0948 are separated by 345 nucleotides
BT0948 and BT0949 are separated by 500 nucleotides
BT0949 and BT0950 overlap by 14 nucleotides
BT0946: BT0946 - hypothetical protein (NCBI ptt file), at 1,155,235 to 1,155,981
BT0946
BT0947: BT0947 - integrase (NCBI ptt file), at 1,156,037 to 1,156,624
BT0947
BT0948: BT0948 - hypothetical protein (NCBI ptt file), at 1,156,970 to 1,157,986
BT0948
BT0949: BT0949 - hypothetical protein (NCBI ptt file), at 1,158,487 to 1,158,714
BT0949
BT0950: BT0950 - hypothetical protein (NCBI ptt file), at 1,158,701 to 1,160,494
BT0950
Group
Condition
BT0946
BT0947
BT0948
BT0949
BT0950
mouse_post_colonization
Post-colonization (Day 10) - Cage1;Mouse1
-0.5
+0.1
-0.3
-3.3
+0.1
nitrogen source
Glucuronamide (N)
-0.3
+0.1
-0.2
-3.0
+0.0
mouse_post_colonization
Post-colonization (Day 1) - Cage6;Mouse1
-0.5
+0.3
-0.3
-2.6
-0.2
carbon source
Mannan from Saccharomyces cerevisiae (C)
+0.1
-0.5
+0.2
-3.1
-0.1
mouse_post_colonization
Post-colonization (Day 3) - Cage6;Mouse2
-0.6
-0.0
-0.7
-1.8
-0.0
phage
DAC23_cps8_10MOI
+0.0
-0.2
+0.0
-2.6
-0.3
mouse_post_colonization
Post-colonization (Day 6) - Cage5;Mouse2
-0.5
-0.1
-0.2
-2.1
-0.0
stress
BHIS with Simvastatin 30 uM
-0.7
+0.2
+0.3
-2.7
+0.2
stress
Varel_Bryant_medium_Glucose with Ramoplanin 0.0015625 mM
+0.1
-0.1
-0.2
-1.9
-0.5
carbon source
(+)-Arabinogalactan (C)
+0.3
-0.5
-0.1
-2.3
-0.0
stress
Varel_Bryant_medium_Glucose with Thioridazine 0.025 mM
+0.2
-0.3
+0.0
-2.3
-0.1
mouse_post_colonization
Post-colonization (Day 8) - Cage5;Mouse2
-1.5
+0.1
-0.3
-0.8
+0.3
stress
Varel_Bryant_medium_Glucose with Cefoxitin 0.0125 mM
-0.7
-0.6
+0.4
-1.2
+0.0
stress
BHIS with Doxycycline hyclate 0.0001953125 mM
-1.0
-0.2
+0.6
-1.8
+0.5
phage
SJC15_cps8_1MOI
+0.7
-0.9
+0.1
-1.8
+0.0
stress
Varel_Bryant medium with Chlorpromazine 0.025 mM
+0.2
+0.2
+0.6
-2.2
-0.4
stress
BHIS with Ciprofloxacin Hydrochloride 0.025 mM
-0.1
+0.5
-0.2
-2.0
+0.3
stress
BHIS with Dimetridazole 0.00625 mM
+0.4
+0.1
+0.3
-2.1
+0.0
stress
Varel_Bryant_medium_Glucose with Chenodeoxycholic 0.5 mg/ml
+0.8
+0.1
+0.1
-2.7
+0.3
nitrogen source
L-aspartic (N)
+1.2
-0.2
+0.1
-2.3
-0.1
stress
BHIS with Dimethyl Sulfoxide 9 vol%
-1.4
+0.2
+0.5
-0.6
+0.1
carbon source
D-Trehalose 20mM (C)
+0.8
+0.3
-0.5
-1.2
+0.2
stress
Varel_Bryant medium with Chlorhexidine diacetate salt 0.0015 mM
+0.5
+0.4
+0.2
-1.7
+0.2
stress
BHIS with 5-Fluorouracil 0.1 mM
-0.5
+0.6
-1.0
+0.9
-0.2
carbon source
dextran, Mw ~200,000; filtered 2.5 mg/ml (C)
+1.0
+0.2
+0.2
-1.5
+0.3
stress
Varel_Bryant_medium_Glucose with Chlorpromazine 0.1 mM
+0.7
-0.5
+0.4
+0.6
-1.0
stress
Varel_Bryant_medium_Glucose with Trimethoprim 0.025 mM
+0.5
-0.7
-0.0
+1.3
-0.4
stress
Varel_Bryant_medium_Glucose with Phenazine ethosulfate 0.2 mM
-0.4
-0.2
+0.5
+1.8
-0.5
nitrogen source
L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen
+1.5
-0.3
+0.3
+0.3
+0.5
stress
BHIS with 5-Fluorouracil 0.1 mM
+0.3
+0.2
+0.4
+1.8
-0.2
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