Fitness for 5 genes in Bacteroides thetaiotaomicron VPI-5482

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500 ntBT0946 and BT0947 are separated by 55 nucleotidesBT0947 and BT0948 are separated by 345 nucleotidesBT0948 and BT0949 are separated by 500 nucleotidesBT0949 and BT0950 overlap by 14 nucleotides BT0946: BT0946 - hypothetical protein (NCBI ptt file), at 1,155,235 to 1,155,981 BT0946 BT0947: BT0947 - integrase (NCBI ptt file), at 1,156,037 to 1,156,624 BT0947 BT0948: BT0948 - hypothetical protein (NCBI ptt file), at 1,156,970 to 1,157,986 BT0948 BT0949: BT0949 - hypothetical protein (NCBI ptt file), at 1,158,487 to 1,158,714 BT0949 BT0950: BT0950 - hypothetical protein (NCBI ptt file), at 1,158,701 to 1,160,494 BT0950
Group Condition BT0946 BT0947 BT0948 BT0949 BT0950
mouse_post_colonization Post-colonization (Day 10) - Cage1;Mouse1 -0.5 +0.1 -0.3 -3.3 +0.1
nitrogen source Glucuronamide (N) -0.3 +0.1 -0.2 -3.0 +0.0
mouse_post_colonization Post-colonization (Day 1) - Cage6;Mouse1 -0.5 +0.3 -0.3 -2.6 -0.2
carbon source Mannan from Saccharomyces cerevisiae (C) +0.1 -0.5 +0.2 -3.1 -0.1
mouse_post_colonization Post-colonization (Day 3) - Cage6;Mouse2 -0.6 -0.0 -0.7 -1.8 -0.0
phage DAC23_cps8_10MOI +0.0 -0.2 +0.0 -2.6 -0.3
mouse_post_colonization Post-colonization (Day 6) - Cage5;Mouse2 -0.5 -0.1 -0.2 -2.1 -0.0
stress BHIS with Simvastatin 30 uM -0.7 +0.2 +0.3 -2.7 +0.2
stress Varel_Bryant_medium_Glucose with Ramoplanin 0.0015625 mM +0.1 -0.1 -0.2 -1.9 -0.5
carbon source (+)-Arabinogalactan (C) +0.3 -0.5 -0.1 -2.3 -0.0
stress Varel_Bryant_medium_Glucose with Thioridazine 0.025 mM +0.2 -0.3 +0.0 -2.3 -0.1
mouse_post_colonization Post-colonization (Day 8) - Cage5;Mouse2 -1.5 +0.1 -0.3 -0.8 +0.3
stress Varel_Bryant_medium_Glucose with Cefoxitin 0.0125 mM -0.7 -0.6 +0.4 -1.2 +0.0
stress BHIS with Doxycycline hyclate 0.0001953125 mM -1.0 -0.2 +0.6 -1.8 +0.5
phage SJC15_cps8_1MOI +0.7 -0.9 +0.1 -1.8 +0.0
stress Varel_Bryant medium with Chlorpromazine 0.025 mM +0.2 +0.2 +0.6 -2.2 -0.4
stress BHIS with Ciprofloxacin Hydrochloride 0.025 mM -0.1 +0.5 -0.2 -2.0 +0.3
stress BHIS with Dimetridazole 0.00625 mM +0.4 +0.1 +0.3 -2.1 +0.0
stress Varel_Bryant_medium_Glucose with Chenodeoxycholic 0.5 mg/ml +0.8 +0.1 +0.1 -2.7 +0.3
nitrogen source L-aspartic (N) +1.2 -0.2 +0.1 -2.3 -0.1
stress BHIS with Dimethyl Sulfoxide 9 vol% -1.4 +0.2 +0.5 -0.6 +0.1
carbon source D-Trehalose 20mM (C) +0.8 +0.3 -0.5 -1.2 +0.2
stress Varel_Bryant medium with Chlorhexidine diacetate salt 0.0015 mM +0.5 +0.4 +0.2 -1.7 +0.2
stress BHIS with 5-Fluorouracil 0.1 mM -0.5 +0.6 -1.0 +0.9 -0.2
carbon source dextran, Mw ~200,000; filtered 2.5 mg/ml (C) +1.0 +0.2 +0.2 -1.5 +0.3
stress Varel_Bryant_medium_Glucose with Chlorpromazine 0.1 mM +0.7 -0.5 +0.4 +0.6 -1.0
stress Varel_Bryant_medium_Glucose with Trimethoprim 0.025 mM +0.5 -0.7 -0.0 +1.3 -0.4
stress Varel_Bryant_medium_Glucose with Phenazine ethosulfate 0.2 mM -0.4 -0.2 +0.5 +1.8 -0.5
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen +1.5 -0.3 +0.3 +0.3 +0.5
stress BHIS with 5-Fluorouracil 0.1 mM +0.3 +0.2 +0.4 +1.8 -0.2
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