Fitness for 5 genes in Bacteroides thetaiotaomicron VPI-5482

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500 ntBT0939 and BT0940 are separated by 194 nucleotidesBT0940 and BT0941 are separated by 216 nucleotidesBT0941 and BT0942 are separated by 416 nucleotidesBT0942 and BT0943 are separated by 231 nucleotides BT0939: BT0939 - hypothetical protein (NCBI ptt file), at 1,149,490 to 1,149,741 BT0939 BT0940: BT0940 - hypothetical protein (NCBI ptt file), at 1,149,936 to 1,150,400 BT0940 BT0941: BT0941 - hypothetical protein (NCBI ptt file), at 1,150,617 to 1,150,880 BT0941 BT0942: BT0942 - putative dinitrogenase reductase activating glycohydrolase (NCBI ptt file), at 1,151,297 to 1,152,085 BT0942 BT0943: BT0943 - penicillin-binding protein 2B (PBP-2B) (NCBI ptt file), at 1,152,317 to 1,153,219 BT0943
Group Condition BT0939 BT0940 BT0941 BT0942 BT0943
stress BHIS with Dimethyl Sulfoxide 10 vol% -0.1 -1.5 -0.4 -0.8 +0.3
stress Thallium(I) acetate 0.025 mg/ml -1.1 +0.6 -0.1 -0.6 -0.4
stress Varel_Bryant_medium_Glucose with Sulfamethizole 0.2 mM -0.3 +0.4 -1.7 +0.3 -0.2
carbon source Hyaluronic from Streptococcus equi +0.3 -1.0 -1.0 +0.6 -0.1
stress Varel_Bryant_medium_Glucose with Sulfaquinoxaline 0.1 mM -1.3 +0.8 -0.8 +0.4 -0.1
stress BHIS with Dimetridazole 0.025 mM +0.2 -0.8 -1.3 +0.7 +0.3
mouse_peg_treatment PEG (Day 3) - Cage3;Mouse2 -0.6 -1.1 +0.5 -0.1 +0.3
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen -0.9 +0.7 -2.0 +0.8 +0.5
mouse_post_colonization Post-colonization (Day 4) - Cage2;Mouse1 -0.9 +0.5 -0.7 +0.4 -0.1
mouse_post_colonization Post-colonization (Day 8) - Cage5;Mouse3 -0.6 +0.7 -0.7 +0.5 -0.4
stress Varel_Bryant_medium_Glucose with Dimethyl Sulfoxide 0.2 vol% +0.6 +0.5 -1.7 -0.0 +0.2
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen -0.3 +0.3 -1.2 +1.4 -0.4
stress BHIS with Oxytetracycline 0.000390625 mM +0.4 -1.2 +0.7 -0.2 +0.2
mouse Post-colonization (Day 4) - Cage1B;Mouse5 +0.7 +0.1 +0.4 -1.0 -0.4
stress Varel_Bryant_medium_Glucose with Levofloxacin 0.0015625 mM +0.2 +1.3 -0.9 -0.2 -0.2
mouse_peg_treatment PEG (Day 1) - Cage3;Mouse1 -0.8 +0.6 +0.5 -0.5 +0.4
mouse_post_colonization Post-colonization (Day 4) - Cage4;Mouse4 -1.2 +0.5 +0.7 +0.3 +0.1
nitrogen source Ammonium chloride (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen -0.9 +0.8 -0.3 +0.5 +0.3
stress Varel_Bryant_medium_Glucose with Dimetridazole 0.0125 mM +0.7 +0.5 -0.6 +0.4 -0.6
nitrogen source L-aspartic (N) -0.9 +0.9 +0.6 +0.3 -0.4
stress BHIS with Doxycycline hyclate 0.0001953125 mM +1.1 -0.1 +0.1 +0.8 -0.6
stress BHIS with Sulfamonomethoxine 0.2 mM -0.7 +0.1 +1.5 +0.1 +0.1
mouse_post_colonization Post-colonization (Day 6) - Cage6;Mouse2 -0.4 +0.9 +0.8 -0.3 +0.3
mouse Post-colonization (Day 7) - Cage1B;Mouse5 +0.5 +0.9 +0.7 -0.2 -0.5
stress Varel_Bryant_medium_Glucose with Chlorpromazine 0.1 mM +1.0 +0.8 +0.8 -0.6 +0.1
stress BHIS with 5-Fluorouracil 0.2 mM +0.2 +0.6 +1.2 +0.6 -0.2
phage SJC16_cps8_10MOI +0.9 +0.7 +0.5 +0.6 -0.3
stress BHIS with Chlorpromazine 0.1 mM +0.7 +0.9 +1.1 +0.1 -0.1
stress BHIS with Dimethyl Sulfoxide 0.2 vol% +1.2 +0.2 +1.0 +0.4 +0.5
phage HNL05_cps7_1MOI +1.3 +0.4 +0.8 +0.4 +0.3
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