Fitness for 5 genes in Bacteroides thetaiotaomicron VPI-5482

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500 ntBT0834 and BT0835 are separated by 3 nucleotidesBT0835 and BT0836 overlap by 4 nucleotidesBT0836 and BT0837 are separated by 110 nucleotidesBT0837 and BT0838 are separated by 201 nucleotides BT0834: BT0834 - conserved hypothetical protein (NCBI ptt file), at 1,029,215 to 1,030,312 BT0834 BT0835: BT0835 - tRNA-guanine transglycosylase (NCBI ptt file), at 1,030,316 to 1,031,446 BT0835 BT0836: BT0836 - ATP-dependent protease (NCBI ptt file), at 1,031,443 to 1,031,916 BT0836 BT0837: BT0837 - ATP-dependent protease (NCBI ptt file), at 1,032,027 to 1,033,907 BT0837 BT0838: BT0838 - putative RNA methyltransferase (NCBI ptt file), at 1,034,109 to 1,034,834 BT0838
Group Condition BT0834 BT0835 BT0836 BT0837 BT0838
carbon source (+)-Arabinogalactan (C) N.D. N.D. N.D. N.D. -1.7
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen N.D. N.D. N.D. N.D. -1.5
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_DTT_noNitrogen N.D. N.D. N.D. N.D. -1.3
stress BHIS with Trimethoprim 15 uM N.D. N.D. N.D. N.D. -1.3
mouse_post_colonization Post-colonization (Day 12) - Cage5;Mouse2 N.D. N.D. N.D. N.D. -1.3
stress BHIS with Trimethoprim 0.00625 mM N.D. N.D. N.D. N.D. -1.2
carbon source D-Glucose 20mM (C) N.D. N.D. N.D. N.D. -1.2
mouse_peg_treatment PEG (Day 1 ) - Cage1;Mouse5 N.D. N.D. N.D. N.D. -1.1
stress BHIS with DAMPA 60 uM N.D. N.D. N.D. N.D. -1.1
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_DTT_NaS_noNitrogen N.D. N.D. N.D. N.D. -1.0
carbon source D-Xylose (C) N.D. N.D. N.D. N.D. +1.0
phage SJC12_cps8_0.1MOI N.D. N.D. N.D. N.D. +1.0
stress BHIS with Oxytetracycline 0.0001953125 mM N.D. N.D. N.D. N.D. +1.0
stress BHIS with 5-Fluorouracil 0.1 mM N.D. N.D. N.D. N.D. +1.0
stress Varel_Bryant_medium_Glucose with Zinc Pyrithione 0.025 mM N.D. N.D. N.D. N.D. +1.0
carbon source Glycogen; filtered 2.5 mg/ml (C) N.D. N.D. N.D. N.D. +1.0
mouse_peg_treatment PEG (Day 1) - Cage2;Mouse1 N.D. N.D. N.D. N.D. +1.0
stress BHIS with Thioridazine 0.0125 mM N.D. N.D. N.D. N.D. +1.1
carbon source Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C) N.D. N.D. N.D. N.D. +1.1
stress BHIS with Paraquat dichloride 0.1 mg/ml N.D. N.D. N.D. N.D. +1.1
stress BHIS with Simvastatin 30 uM N.D. N.D. N.D. N.D. +1.1
carbon source Starch soluble; autoclaved 2.5 mg/ml (C) N.D. N.D. N.D. N.D. +1.1
carbon source Pullulan; autoclaved 2.5 mg/ml (C) N.D. N.D. N.D. N.D. +1.1
stress BHIS with Thioridazine 0.0125 mM N.D. N.D. N.D. N.D. +1.1
stress Varel_Bryant_medium_Glucose with Chlorpromazine 0.05 mM N.D. N.D. N.D. N.D. +1.1
carbon source Mucin from porcine stomach type III; autoclaved 2.5 mg/ml (C) N.D. N.D. N.D. N.D. +1.1
stress BHIS with 5-Fluorouracil 0.1 mM N.D. N.D. N.D. N.D. +1.2
stress Varel_Bryant_medium_Glucose with Phenazine ethosulfate 0.1 mM N.D. N.D. N.D. N.D. +1.3
stress BHIS with Dimetridazole 0.025 mM N.D. N.D. N.D. N.D. +1.4
mouse_peg_treatment PEG (Day 3) - Cage2;Mouse1 N.D. N.D. N.D. N.D. +2.2
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