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Protein
Homologs
Fitness for 5 genes in
Bacteroides thetaiotaomicron VPI-5482
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
BT0791 and BT0792 are separated by 88 nucleotides
BT0792 and BT0793 are separated by 12 nucleotides
BT0793 and BT0794 are separated by 102 nucleotides
BT0794 and BT0795 are separated by 128 nucleotides
BT0791: BT0791 - conserved hypothetical protein (NCBI ptt file), at 980,672 to 981,403
BT0791
BT0792: BT0792 - xylulokinase (EC 2.7.1.17)
(from data)
, at 981,492 to 982,985
BT0792
BT0793: BT0793 - xylose isomerase (NCBI ptt file), at 982,998 to 984,314
BT0793
BT0794: BT0794 - D-xylose-proton symporter (D-xylose transporter) (NCBI ptt file), at 984,417 to 985,871
BT0794
BT0795: BT0795 - conserved hypothetical protein (NCBI ptt file), at 986,000 to 986,620
BT0795
Group
Condition
BT0791
BT0792
BT0793
BT0794
BT0795
carbon source
D-Xylose (C)
-1.2
-5.2
-5.8
-4.5
+0.1
carbon source
D-Xylose (C)
-1.5
-4.3
-4.6
-3.8
-0.2
carbon source
D-Xylose 2.5 mg/ml (C)
-1.1
-1.6
-1.4
-2.5
+0.7
carbon source
D-Xylose 2.5 mg/ml (C)
-0.7
-1.4
-1.3
-2.2
+1.0
survival
aerobic shaking 48 hr copy A
-1.9
-1.0
-0.8
-0.2
+0.4
carbon source
Xylan from corn core; autoclaved 2.5 mg/ml (C)
-0.4
-0.8
-1.1
-0.8
+0.0
carbon source
(+)-Arabinogalactan (C)
-0.2
-0.8
-0.4
-0.7
-1.0
stress
Thallium(I) acetate 0.01 mg/ml
-0.1
-1.3
-0.7
-0.5
-0.4
carbon source
1,4-B-D-Galactobiose (C)
+0.1
-0.8
-0.7
+0.0
-1.6
stress
BHIS with Doxycycline hyclate 0.000390625 mM
-0.1
+0.2
-1.2
-1.4
-0.2
stress
BHIS with Chloride 350 mM
+0.6
-0.1
-0.5
-0.5
-1.4
nitrogen source
L-Valine (N)
+0.3
-1.1
-0.6
-0.7
+0.4
carbon source
Mannan from Saccharomyces cerevisiae (C)
+1.1
-1.3
-0.6
-0.1
-0.7
carbon source
Mannan from Saccharomyces cerevisiae; filtered 2.5 mg/ml (C)
+0.7
-0.2
-0.9
+0.6
-1.6
carbon source
Mannan from Saccharomyces cerevisiae; filtered 2.5 mg/ml (C)
+0.4
-0.2
-0.2
+0.5
-1.8
mouse_post_colonization
Post-colonization (Day 6) - Cage6;Mouse2
+0.0
-0.9
+1.0
-0.2
-1.2
stress
BHIS with Cephalothin 0.1 mM
-1.2
-0.2
+0.1
-0.7
+0.9
stress
Varel_Bryant_medium_Glucose with Econazole nitrate salt 0.025 mM
+0.1
-0.5
-1.5
-0.2
+1.1
stress
Varel_Bryant_medium_Glucose with Zinc Pyrithione 0.05 mM
+0.0
+0.7
+0.6
-0.5
-1.6
carbon source
Mannan from Saccharomyces cerevisiae (C)
+1.2
+0.4
-0.9
+0.4
-1.6
stress
BHIS with Sulfaquinoxaline 0.1 mM
-1.5
+0.3
+0.7
-0.3
+0.6
mouse_post_colonization
Post-colonization (Day 1) - Cage5;Mouse4
+0.3
-1.5
+1.1
-0.2
+0.5
stress
BHIS with Trimethoprim 0.0125 mM
-1.4
+1.1
+0.7
-0.5
+0.7
stress
BHIS with Chlorpromazine 0.2 mM
-1.2
+1.8
-0.1
+0.3
-0.1
phage
DAC16_cps7_1MOI
-1.2
+0.2
+0.3
+0.2
+1.5
stress
BHIS with Chlorpromazine 0.1 mM
-0.8
+1.0
+0.6
-0.6
+0.8
stress
BHIS with 5-Fluorouracil 0.1 mM
-0.9
+0.3
+1.9
+0.2
-0.1
nitrogen source
Ammonium chloride (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen
+0.2
+0.8
-0.5
-0.3
+1.3
phage
SJC12_cps8_0.1MOI
-1.0
+0.5
+0.8
+0.6
+0.7
stress
BHIS with Trimethoprim 0.00625 mM
-0.5
+0.6
+1.7
+0.1
+0.7
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