Fitness for 5 genes in Bacteroides thetaiotaomicron VPI-5482

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500 ntBT0782 and BT0783 overlap by 52 nucleotidesBT0783 and BT0784 are separated by 278 nucleotidesBT0784 and BT0785 are separated by 181 nucleotidesBT0785 and BT0786 are separated by 390 nucleotides BT0782: BT0782 - hypothetical protein (NCBI ptt file), at 972,573 to 972,776 BT0782 BT0783: BT0783 - hypothetical protein (NCBI ptt file), at 972,725 to 972,913 BT0783 BT0784: BT0784 - putative RNA-binding protein (NCBI ptt file), at 973,192 to 973,437 BT0784 BT0785: BT0785 - glutamine synthetase I (NCBI ptt file), at 973,619 to 975,121 BT0785 BT0786: BT0786 - putative integral membrane protein (NCBI ptt file), at 975,512 to 976,234 BT0786
Group Condition BT0782 BT0783 BT0784 BT0785 BT0786
stress BHIS with Dimethyl Sulfoxide 9 vol% -3.3 -0.1 N.D. -0.2 -0.3
carbon source Red Arabinan from sugar-beet (C) -1.9 -1.9 N.D. -0.0 +0.0
stress BHIS with Anhydrotetracycline 0.00078125 mM -1.5 -2.3 N.D. +0.4 +0.3
stress BHIS with Lithocholic 0.4 mg/ml -1.3 -2.0 N.D. +0.2 +0.6
phage SJC16_cps8_1MOI +1.3 -2.5 N.D. +0.2 -1.2
phage SJC15_cps8_1MOI +1.1 -1.7 N.D. +0.0 -0.9
stress BHIS with Ceftriaxone hemi(heptahydrate) 0.1 mM +0.5 -2.5 N.D. +0.5 +0.0
stress Varel_Bryant_medium_Glucose with Dimetridazole 0.0125 mM +1.1 -1.9 N.D. -0.7 +0.2
stress BHIS with Spiramycin 0.2 mM +0.8 -2.4 N.D. +0.3 +0.1
stress BHIS with Zinc Pyrithione 0.0125 mM +0.9 -2.4 N.D. +0.2 +0.2
phage SJC16_cps8_10MOI +0.9 -1.5 N.D. +0.7 -0.9
nitrogen source L-aspartic (N) -1.8 +0.3 N.D. -0.2 +1.4
stress Varel_Bryant_medium_Glucose with Sulfamethizole 0.2 mM +1.3 -1.7 N.D. -0.5 +0.7
mouse_post_colonization Post-colonization (Day 6) - Cage6;Mouse2 -1.7 +2.0 N.D. -0.1 -0.1
stress BHIS with Sulfamonomethoxine 0.2 mM +1.7 -2.1 N.D. +0.3 +0.1
stress Varel_Bryant_medium_Glucose with Phenazine ethosulfate 0.2 mM +1.5 -1.5 N.D. -0.3 +0.4
stress Varel_Bryant_medium_Glucose with Econazole nitrate salt 0.0125 mM +1.5 -1.7 N.D. +0.4 +0.1
mouse_post_colonization Post-colonization (Day 1) - Cage6;Mouse1 -1.5 +2.0 N.D. +0.2 +0.0
stress Varel_Bryant_medium_Glucose with Dimethyl Sulfoxide 0.2 vol% +2.3 -1.6 N.D. +0.4 +0.1
stress BHIS with Sulfamonomethoxine 0.1 mM +2.1 -1.7 N.D. +0.4 +0.4
stress Varel_Bryant_medium_Glucose with Chlorpromazine 0.1 mM +2.4 -1.0 N.D. +0.8 +0.7
carbon source Rhamnogalacturonan - from potato; autoclaved 2.5 mg/ml (C) +1.1 +2.4 N.D. -0.1 -0.4
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_DTT_NaS_noNitrogen +0.4 +2.8 N.D. +0.2 +0.2
stress BHIS with Trimethoprim 0.0125 mM +1.4 +1.3 N.D. +0.5 +0.5
stress BHIS with Trimethoprim 0.00625 mM +1.3 +1.3 N.D. +0.6 +0.6
stress BHIS with Trimethoprim 0.00625 mM +2.6 -0.3 N.D. +0.6 +0.8
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_DTT_noNitrogen +2.1 +1.9 N.D. +0.2 -0.3
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_DTT_NaS_noNitrogen +1.6 +1.6 N.D. +0.5 +0.2
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_DTT_noNitrogen +1.1 +1.8 N.D. +0.2 +0.8
stress BHIS with 5-Fluorouracil 0.1 mM +2.4 +0.4 N.D. +1.1 +0.8
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