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Fitness for 5 genes in
Bacteroides thetaiotaomicron VPI-5482
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
BT0682 and BT0683 are separated by 56 nucleotides
BT0683 and BT0684 are separated by 187 nucleotides
BT0684 and BT0685 are separated by 351 nucleotides
BT0685 and BT0686 are separated by 168 nucleotides
BT0682: BT0682 - two-component system response regulator (NCBI ptt file), at 846,392 to 847,129
BT0682
BT0683: BT0683 - alpha-glucosidase (NCBI ptt file), at 847,186 to 849,201
BT0683
BT0684: BT0684 - putative long-chain-fatty-acid--CoA ligase (NCBI ptt file), at 849,389 to 851,053
BT0684
BT0685: BT0685 - putative Na+/H+ exchanger (NCBI ptt file), at 851,405 to 852,877
BT0685
BT0686: BT0686 - putative uracil permease (uracil transporter) (NCBI ptt file), at 853,046 to 854,230
BT0686
Group
Condition
BT0682
BT0683
BT0684
BT0685
BT0686
stress
BHIS with Dimetridazole 0.00625 mM
-0.1
-0.3
-1.8
-0.8
-0.1
stress
BHIS with Simvastatin 30 uM
-0.1
-0.2
-2.2
-0.1
-0.3
stress
Varel_Bryant_medium_Glucose with Dimetridazole 0.0125 mM
-0.7
-0.5
-0.7
+0.2
-0.8
stress
Varel_Bryant_medium_Glucose with Econazole nitrate salt 0.025 mM
-0.7
-0.2
-1.7
-0.7
+1.0
mouse_recovery_after_peg
Post-colonization (Day 14) - Cage4;Mouse2
-0.2
-1.3
+0.3
-1.0
+0.0
stress
BHIS with Dimethyl Sulfoxide 0.05 vol%
-0.6
-0.2
-1.6
-0.0
+0.3
stress
BHIS with Sulfamonomethoxine 0.2 mM
-0.4
-1.5
-0.8
-0.4
+0.9
stress
Bile salts 0.5 mg/ml
-1.2
-0.2
-0.2
+0.4
-0.9
stress
BHIS with Simvastatin 30 uM
+0.2
+0.2
-2.0
-0.6
+0.5
stress
BHIS with Thioridazine 0.025 mM
-0.8
-1.0
-0.7
+0.4
+0.3
stress
BHIS with Fusidic 0.002 mg/ml
+0.1
+0.3
-1.4
+0.2
-0.8
stress
Varel_Bryant_medium_Glucose with Furaltadone 0.1 mM
-0.3
-1.0
-0.9
+0.1
+0.5
stress
BHIS with Cephalothin 0.625 mg/ml
-1.4
-0.7
+0.0
+0.6
-0.1
stress
BHIS with Trimethoprim 0.00625 mM
-0.9
-1.3
+0.1
+0.7
-0.1
mouse_peg_treatment
PEG (Day 1) - Cage3;Mouse1
-0.3
-1.1
-0.8
+0.3
+0.6
mouse_post_colonization
Post-colonization (Day 14) - Cage3;Mouse1
-0.4
-0.9
-0.9
+0.4
+0.4
mouse_post_colonization
Post-colonization (Day 14) - Cage7;Mouse3
-0.0
-1.1
-0.9
+0.2
+1.0
stress
BHIS with Trimethoprim 0.0125 mM
-0.7
-1.1
-0.1
+0.3
+0.8
carbon source
Heparin from porcine intestinal mucosa (C)
-1.5
-0.2
-0.5
+0.6
+0.8
carbon source
Heparin from porcine intestinal mucosa (C)
-1.0
-0.4
-0.6
+0.6
+0.8
stress
BHIS with Chlorpromazine 0.2 mM
-0.5
-1.0
+0.3
+1.1
-0.3
survival
aerobic shaking 48 hr copy B
-0.3
-0.7
+0.4
+0.8
-0.8
stress
BHIS with Cefoxitin 0.025 mM
-0.8
-0.9
+0.4
-0.3
+1.2
stress
BHIS with 5-Fluorouracil 0.1 mM
-0.3
-1.1
-0.1
+0.5
+0.8
stress
BHIS with Cephalothin 0.2 mM
-0.6
-0.8
+1.2
-0.1
+0.2
stress
BHIS with 5-Fluorouracil 0.2 mM
-0.9
-1.0
+0.3
+0.7
+0.7
nitrogen source
L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen
-0.7
-0.4
+1.0
+0.3
-0.3
nitrogen source
L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen
+0.4
-0.7
+0.3
+0.7
-0.5
stress
BHIS with Dimetridazole 0.025 mM
-0.1
+0.8
-1.1
+0.1
+0.9
mouse_post_colonization
Post-colonization (Day 14) - Cage1;Mouse3
-0.3
-0.8
+0.7
+0.1
+1.0
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