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Homologs
Fitness for 5 genes in
Bacteroides thetaiotaomicron VPI-5482
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
BT0658 and BT0659 are separated by 89 nucleotides
BT0659 and BT0660 are separated by 188 nucleotides
BT0660 and BT0661 are separated by 758 nucleotides
BT0661 and BT0662 are separated by 359 nucleotides
BT0658: BT0658 - hypothetical protein (NCBI ptt file), at 810,944 to 811,639
BT0658
BT0659: BT0659 - hypothetical protein (NCBI ptt file), at 811,729 to 812,766
BT0659
BT0660: BT0660 - conserved hypothetical protein (NCBI ptt file), at 812,955 to 814,106
BT0660
BT0661: BT0661 - hypothetical protein (NCBI ptt file), at 814,865 to 816,091
BT0661
BT0662: BT0662 - hypothetical protein (NCBI ptt file), at 816,451 to 818,247
BT0662
Group
Condition
BT0658
BT0659
BT0660
BT0661
BT0662
carbon source
Levan - from Erwinia herbicola; autoclaved 2.5 mg/ml (C)
-1.3
-0.4
-1.2
+0.1
-0.0
stress
Varel_Bryant_medium_Glucose with Trimethoprim 0.025 mM
-2.6
-0.6
+0.4
+0.4
-0.0
stress
Varel_Bryant_medium_Glucose with Vancomycin Hydrochloride from Streptomyces orientalis 0.00625 mM
-1.4
-0.0
+0.3
+0.4
-0.8
nitrogen source
Ammonium chloride (N)
-0.5
+0.5
-1.3
+0.0
-0.3
stress
BHIS with Simvastatin 30 uM
-1.2
-0.4
-0.6
+0.1
+0.6
stress
Varel_Bryant_medium_Glucose with Deoxycholic 0.2 mg/ml
-2.0
+0.2
+0.4
-0.1
+0.1
phage
HNL05_cps7_1MOI
-2.0
-0.2
+0.1
+0.3
+0.5
stress
Varel_Bryant_medium_Glucose with Bile salts 0.5 mg/mL; pH 7
-2.6
+0.1
+0.1
+0.7
+0.3
stress
BHIS with Zinc Pyrithione 0.05 mM
-1.6
-0.5
+0.2
-0.0
+0.6
stress
Varel_Bryant_medium_Glucose with Indolicidin 0.002 mg/ml
+0.9
-0.4
-0.6
-0.0
-0.6
phage
DAC16_cps7_10MOI
-0.8
+0.3
+0.7
-0.6
-0.4
stress
BHIS with Doxycycline hyclate 0.000390625 mM
-1.1
+0.8
-0.1
+0.4
-0.7
stress
Varel_Bryant_medium_Glucose with Econazole nitrate salt 0.025 mM
+0.8
+0.2
-0.4
-0.6
-0.6
stress
BHIS with Simvastatin 30 uM
-1.0
+0.4
-0.8
+1.0
-0.2
stress
BHIS with Chlorpromazine 0.1 mM
-1.7
+0.5
+0.5
+0.1
+0.1
stress
BHIS with Chloride 350 mM
+1.0
-0.3
+0.2
-0.5
-0.7
mouse_coculture
cage1; mouse3; day5; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003
-1.4
+0.4
+0.6
+0.4
+0.0
mouse_peg_treatment
PEG (Day 3) - Cage2;Mouse1
-1.5
-0.0
+0.7
+0.8
+0.1
nitrogen source
L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen
-1.2
+0.6
+0.7
+0.1
-0.2
stress
BHIS with Dimetridazole 0.025 mM
+1.0
+0.8
-0.2
-0.8
-0.8
mouse_peg_treatment
PEG (Day 2) - Cage3;Mouse3
-0.6
-0.1
+1.0
+0.3
-0.5
stress
Varel_Bryant_medium_Glucose with Bile salts 0.5 mg/mL; pH 7
-1.3
-0.0
+0.6
+0.7
+0.6
mouse
Post-colonization (Day 7) - Cage1C;Mouse2
-0.6
+0.5
+1.2
-0.1
-0.4
stress
BHIS with Chlorpromazine 0.2 mM
-0.8
+0.4
+1.1
+0.2
+0.2
mouse_post_colonization
Post-colonization (Day 12) - Cage7;Mouse3
-0.7
+0.4
+0.8
+0.8
-0.1
stress
BHIS with Trimethoprim 0.00625 mM
-0.5
+0.7
+1.2
-0.1
+0.2
stress
BHIS with Trimethoprim 0.00625 mM
-0.8
+0.5
+0.7
+0.4
+0.9
mouse_post_colonization
Post-colonization (Day 14) - Cage3;Mouse1
-0.4
+0.4
+0.4
+0.5
+0.9
phage
SJC16_cps8_10MOI
-0.5
+0.6
+1.0
+0.7
+0.1
mouse_peg_treatment
PEG (Day 2) - Cage4;Mouse1
-0.3
+0.6
+1.0
+1.0
+0.2
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