Fitness for 5 genes in Bacteroides thetaiotaomicron VPI-5482

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500 ntBT0576 and BT0577 are separated by 7 nucleotidesBT0577 and BT0578 are separated by 142 nucleotidesBT0578 and BT0579 are separated by 42 nucleotidesBT0579 and BT0580 are separated by 75 nucleotides BT0576: BT0576 - hypothetical protein (NCBI ptt file), at 711,725 to 712,447 BT0576 BT0577: BT0577 - LysM-repeat proteins and domains (NCBI ptt file), at 712,455 to 714,221 BT0577 BT0578: BT0578 - excinuclease ABC subunit A (NCBI ptt file), at 714,364 to 717,204 BT0578 BT0579: BT0579 - putative transcription regulator (NCBI ptt file), at 717,247 to 717,726 BT0579 BT0580: BT0580 - putative H+/peptide symporter (NCBI ptt file), at 717,802 to 719,316 BT0580
Group Condition BT0576 BT0577 BT0578 BT0579 BT0580
mouse_post_colonization Post-colonization (Day 12) - Cage7;Mouse3 N.D. N.D. -1.7 N.D. -2.1
mouse_post_colonization Post-colonization (Day 14) - Cage3;Mouse1 N.D. N.D. -2.4 N.D. -1.2
mouse_peg_treatment PEG (Day 2) - Cage3;Mouse3 N.D. N.D. -2.4 N.D. -1.0
mouse_post_colonization Post-colonization (Day 14) - Cage3;Mouse3 N.D. N.D. -2.0 N.D. -1.4
mouse_peg_treatment PEG (Day 1) - Cage3;Mouse1 N.D. N.D. -2.2 N.D. -1.2
mouse_post_colonization Post-colonization (Day 8) - Cage6;Mouse1 N.D. N.D. -2.5 N.D. -0.8
mouse_peg_treatment PEG (Day 3) - Cage3;Mouse2 N.D. N.D. -2.1 N.D. -1.0
mouse_post_colonization Post-colonization (Day 10) - Cage5;Mouse2 N.D. N.D. -1.9 N.D. -1.2
mouse_post_colonization Post-colonization (Day 14) - Cage2;Mouse2 N.D. N.D. -1.8 N.D. -1.3
mouse_post_colonization Post-colonization (Day 8) - Cage3;Mouse1 N.D. N.D. -2.4 N.D. -0.8
mouse_post_colonization Post-colonization (Day 12) - Cage2;Mouse1 N.D. N.D. -1.9 N.D. -1.2
mouse_post_colonization Post-colonization (Day 10) - Cage6;Mouse2 N.D. N.D. -1.7 N.D. -1.4
mouse_post_colonization Post-colonization (Day 10) - Cage3;Mouse1 N.D. N.D. -2.1 N.D. -0.8
mouse_post_colonization Post-colonization (Day 6) - Cage1;Mouse4 N.D. N.D. -1.9 N.D. -1.0
stress BHIS with Nitrofurantoin 0.15 mM N.D. N.D. -2.6 N.D. -0.3
stress BHIS with 5-Fluorouracil 0.1 mM N.D. N.D. -2.2 N.D. -0.7
mouse_post_colonization Post-colonization (Day 12) - Cage4;Mouse1 N.D. N.D. -2.1 N.D. -0.8
mouse_post_colonization Post-colonization (Day 12) - Cage1;Mouse3 N.D. N.D. -1.7 N.D. -1.1
stress BHIS with Dimetridazole 0.0125 mM N.D. N.D. -2.8 N.D. -0.1
mouse_post_colonization Post-colonization (Day 8) - Cage1;Mouse2 N.D. N.D. -1.7 N.D. -1.2
stress Varel_Bryant_medium_Glucose with Furaltadone 0.05 mM N.D. N.D. -2.4 N.D. -0.5
mouse_post_colonization Post-colonization (Day 6) - Cage7;Mouse2 N.D. N.D. -2.2 N.D. -0.6
mouse_post_colonization Post-colonization (Day 10) - Cage1;Mouse4 N.D. N.D. -1.4 N.D. -1.4
mouse_post_colonization Post-colonization (Day 8) - Cage2;Mouse3 N.D. N.D. -1.4 N.D. -1.4
mouse_post_colonization Post-colonization (Day 6) - Cage3;Mouse1 N.D. N.D. -2.3 N.D. -0.5
stress Varel_Bryant_medium_Glucose with Furaltadone 0.1 mM N.D. N.D. -2.6 N.D. -0.1
mouse_post_colonization Post-colonization (Day 12) - Cage6;Mouse1 N.D. N.D. -1.9 N.D. -0.9
stress BHIS with Chlorpromazine 0.1 mM N.D. N.D. -1.4 N.D. +2.5
stress BHIS with Thioridazine 0.0125 mM N.D. N.D. -0.9 N.D. +2.2
stress BHIS with Chlorpromazine 0.2 mM N.D. N.D. -1.1 N.D. +2.4
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