Fitness for 5 genes in Bacteroides thetaiotaomicron VPI-5482

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500 ntBT0491 and BT0492 overlap by 4 nucleotidesBT0492 and BT0493 are separated by 33 nucleotidesBT0493 and BT0494 are separated by 51 nucleotidesBT0494 and BT0495 are separated by 31 nucleotides BT0491: BT0491 - conserved hypothetical protein (NCBI ptt file), at 607,082 to 607,408 BT0491 BT0492: BT0492 - integral membrane protein (NCBI ptt file), at 607,405 to 608,022 BT0492 BT0493: BT0493 - hypothetical protein (NCBI ptt file), at 608,056 to 608,757 BT0493 BT0494: BT0494 - protoporphyrin IX magnesium chelatase (NCBI ptt file), at 608,809 to 611,373 BT0494 BT0495: BT0495 - cobalamin biosynthesis protein (NCBI ptt file), at 611,405 to 613,201 BT0495
Group Condition BT0491 BT0492 BT0493 BT0494 BT0495
carbon source Mannan from Saccharomyces cerevisiae; autoclaved 2.5 mg/ml (C) -1.7 -0.8 -0.5 -0.8 -0.2
carbon source Mannan from Saccharomyces cerevisiae (C) -1.8 -0.7 -0.6 -0.3 -0.5
stress Varel_Bryant medium with Irgasan 0.005 mM -1.4 -0.4 -1.2 -0.4 -0.3
carbon source Mannan from Saccharomyces cerevisiae; autoclaved 2.5 mg/ml (C) -1.3 -0.5 -0.9 -0.3 -0.3
stress Varel_Bryant_medium_Glucose with Chenodeoxycholic 0.25 mg/ml -2.8 +0.1 -0.3 +0.2 -0.0
stress BHIS with Trimethoprim 0.0125 mM -1.6 -0.4 +0.3 +0.3 -1.1
stress BHIS with Dimetridazole 0.025 mM -1.9 -0.1 -0.5 -0.3 +0.6
carbon source D-Xylose 2.5 mg/ml (C) -2.2 +0.3 -0.1 -0.2 +0.4
carbon source D-Maltose (C) -1.8 +0.3 -0.6 -0.3 +0.5
carbon source D-Glucose 20mM (C) -2.4 -0.1 +0.3 +0.3 +0.2
mouse_post_colonization Post-colonization (Day 12) - Cage5;Mouse4 -2.3 -0.2 +0.2 +0.8 +0.3
carbon source 6-O-Acetyl-D-glucose (C) -1.9 +0.6 -0.2 +0.2 +0.3
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen -1.3 +1.2 -0.3 -0.2 -0.2
stress BHIS with Levofloxacin 0.0015625 mM -2.0 +0.7 +0.1 +0.2 +0.3
carbon source Hyaluronic from Streptococcus equi -1.7 +0.3 +0.3 -0.3 +0.9
stress BHIS with Simvastatin 30 uM -1.2 +0.7 +0.4 +0.4 -0.7
carbon source Melibiose (C) -1.2 +0.6 -0.5 +0.3 +0.7
stress BHIS with 2-Mercaptopyridine N-oxide 0.2 mM -1.8 +0.6 +0.6 -0.0 +0.4
mouse_post_colonization Post-colonization (Day 8) - Cage3;Mouse4 -1.9 +0.3 +0.6 +0.4 +0.4
mouse Post-colonization (Day 7) - Cage1C;Mouse1 +1.3 -0.2 -1.3 -0.1 +0.5
phage SJC12_cps8_0.1MOI +0.5 -0.2 -1.3 +0.9 +0.4
phage SJC16_cps8_10MOI +1.0 -0.2 -0.6 +0.9 -0.8
nitrogen source L-Valine (N) +0.9 +0.5 -1.0 -0.4 +0.4
stress Varel_Bryant_medium_Glucose with Chlorpromazine 0.1 mM +2.9 -0.9 -0.8 +0.2 -0.6
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_DTT_noNitrogen +1.5 -0.0 -1.1 -0.0 +0.6
carbon source (+)-Arabinogalactan (C) +1.2 +0.7 -0.4 -0.7 +0.3
stress BHIS with Dimetridazole 0.0125 mM -1.1 +0.5 +1.0 +0.5 +0.4
phage ARB14_cps1_0.1MOI +1.6 -0.2 +0.9 +0.5 -0.1
stress BHIS with Chlorpromazine 0.2 mM +0.2 +1.4 +1.2 +0.7 +0.1
carbon source D-Glucose 20mM (C) +0.9 +1.0 +1.3 +0.3 +0.3
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