Fitness for 5 genes in Bacteroides thetaiotaomicron VPI-5482

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500 ntBT0412 and BT0413 are separated by 16 nucleotidesBT0413 and BT0414 are separated by 20 nucleotidesBT0414 and BT0415 are separated by 39 nucleotidesBT0415 and BT0416 are separated by 11 nucleotides BT0412: BT0412 - putative Na+/sulfate symporter (NCBI ptt file), at 497,948 to 499,501 BT0412 BT0413: BT0413 - putative adenylylsulfate kinase (NCBI ptt file), at 499,518 to 500,123 BT0413 BT0414: BT0414 - sulfate adenylyltransferase subunit 2 (NCBI ptt file), at 500,144 to 501,052 BT0414 BT0415: BT0415 - sulfate adenylyltransferase subunit 1/adenylylsulfate kinase (NCBI ptt file), at 501,092 to 502,549 BT0415 BT0416: BT0416 - conserved hypothetical protein (NCBI ptt file), at 502,561 to 503,667 BT0416
Group Condition BT0412 BT0413 BT0414 BT0415 BT0416
mouse_post_colonization Post-colonization (Day 10) - Cage3;Mouse1 -2.5 N.D. +1.1 -1.1 -1.1
mouse_peg_treatment PEG (Day 1) - Cage3;Mouse1 -1.7 N.D. +1.9 -1.6 -2.1
mouse_post_colonization Post-colonization (Day 8) - Cage3;Mouse1 -2.0 N.D. +1.3 -0.6 -1.6
mouse_post_colonization Post-colonization (Day 14) - Cage3;Mouse1 -2.0 N.D. +2.5 -1.3 -1.5
mouse_peg_treatment PEG (Day 3) - Cage3;Mouse2 -2.2 N.D. +3.0 -1.5 -1.4
mouse_peg_treatment PEG (Day 1) - Cage2;Mouse1 -2.1 N.D. +2.0 -0.7 -1.1
mouse_post_colonization Post-colonization (Day 10) - Cage4;Mouse1 -1.5 N.D. +2.7 -1.3 -1.4
mouse_post_colonization Post-colonization (Day 8) - Cage7;Mouse2 -1.1 N.D. +3.1 -1.2 -1.5
mouse_post_colonization Post-colonization (Day 10) - Cage4;Mouse5 -1.7 N.D. +4.1 -1.6 -1.6
mouse_post_colonization Post-colonization (Day 12) - Cage4;Mouse1 -1.3 N.D. +3.4 -1.6 -1.2
mouse_post_colonization Post-colonization (Day 12) - Cage7;Mouse3 -1.8 N.D. +3.4 -0.9 -0.8
mouse_post_colonization Post-colonization (Day 12) - Cage4;Mouse5 -1.0 N.D. +3.0 -1.1 -0.9
mouse_post_colonization Post-colonization (Day 12) - Cage5;Mouse3 -0.8 N.D. +3.5 -1.2 -1.2
mouse_post_colonization Post-colonization (Day 10) - Cage5;Mouse3 -1.2 N.D. +3.5 -1.1 -0.8
mouse_recovery_after_peg Post-colonization (Day 14) - Cage4;Mouse2 -1.5 N.D. +3.9 -0.8 -1.1
mouse_post_colonization Post-colonization (Day 14) - Cage5;Mouse1 -1.3 N.D. +3.8 -1.2 -0.5
mouse_peg_treatment PEG (Day 2) - Cage4;Mouse1 -1.6 N.D. +4.5 -0.9 -1.2
mouse_peg_treatment PEG (Day 2) - Cage5;Mouse1 -1.3 N.D. +4.0 -0.9 -1.0
mouse_peg_treatment PEG (Day 1) - Cage4;Mouse1 -1.5 N.D. +4.8 -1.3 -1.1
mouse_post_colonization Post-colonization (Day 10) - Cage5;Mouse2 -0.4 N.D. +3.4 -0.9 -1.1
mouse_post_colonization Post-colonization (Day 14) - Cage4;Mouse4 -0.7 N.D. +3.8 -1.1 -0.9
mouse_post_colonization Post-colonization (Day 10) - Cage7;Mouse2 -0.6 N.D. +3.8 -0.8 -0.9
mouse_post_colonization Post-colonization (Day 12) - Cage5;Mouse2 -1.1 N.D. +4.8 -0.7 -1.6
mouse_post_colonization Post-colonization (Day 10) - Cage5;Mouse5 -0.9 N.D. +3.9 -0.4 -0.9
mouse_post_colonization Post-colonization (Day 12) - Cage7;Mouse1 -1.0 N.D. +4.7 -0.4 -1.2
mouse_post_colonization Post-colonization (Day 14) - Cage7;Mouse3 -1.2 N.D. +4.5 -0.7 -0.3
mouse_post_colonization Post-colonization (Day 12) - Cage3;Mouse4 -0.7 N.D. +4.8 -1.0 -0.9
mouse_post_colonization Post-colonization (Day 8) - Cage5;Mouse5 -0.9 N.D. +3.7 +0.2 -0.7
mouse Post-colonization (Day 7) - Cage1B;Mouse5 +0.6 N.D. +5.0 -0.2 +0.6
mouse Post-colonization (Day 7) - Cage1A;Mouse1 +0.7 N.D. +4.7 +0.1 +0.5
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