Fitness for 5 genes in Bacteroides thetaiotaomicron VPI-5482

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500 ntBT0308 and BT0309 are separated by 74 nucleotidesBT0309 and BT0310 overlap by 17 nucleotidesBT0310 and BT0311 are separated by 86 nucleotidesBT0311 and BT0312 are separated by 37 nucleotides BT0308: BT0308 - putative glycosyl hydrolase (NCBI ptt file), at 370,710 to 371,414 BT0308 BT0309: BT0309 - Dihydrolipoamide dehydrogenase (NCBI ptt file), at 371,489 to 372,832 BT0309 BT0310: BT0310 - lipoate-protein ligase A (NCBI ptt file), at 372,816 to 373,535 BT0310 BT0311: BT0311 - lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (NCBI ptt file), at 373,622 to 374,992 BT0311 BT0312: BT0312 - 2-oxoisovalerate dehydrogenase beta subunit (NCBI ptt file), at 375,030 to 377,066 BT0312
Group Condition BT0308 BT0309 BT0310 BT0311 BT0312
survival aerobic shaking 48 hr copy A +0.1 -0.7 -1.4 -0.4 -1.0
carbon source Mannan from Saccharomyces cerevisiae; filtered 2.5 mg/ml (C) -1.3 -0.6 +0.0 -0.6 +0.3
carbon source Mannan from Saccharomyces cerevisiae; filtered 2.5 mg/ml (C) -0.9 -0.7 +0.1 -0.3 -0.3
carbon source D-Glucose 5 mg/ml (C) -0.9 -0.5 +0.2 -0.4 -0.2
stress BHIS with Chlorhexidine diacetate salt 0.0015625 mM +0.2 -1.1 -0.3 -0.3 -0.4
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen -0.2 -0.6 -0.8 +0.3 -0.5
stress BHIS with Antimycin A 0.2 mM +0.5 -1.5 +0.0 -0.2 -0.3
carbon source a-Cyclodextrin 2.5 mg/ml (C) -0.7 -0.4 +0.3 -0.5 -0.1
survival aerobic shaking 48 hr copy B +0.4 +0.2 -0.8 -0.2 -0.9
stress BHIS with Dimetridazole 0.00625 mM +0.7 -0.8 -0.3 -0.3 +0.0
stress BHIS with Dimetridazole 0.0125 mM -0.4 -0.5 -0.5 +0.3 +0.4
stress Varel_Bryant_medium_Glucose with Dimethyl Sulfoxide 0.2 vol% -0.7 +0.3 -0.7 +0.2 +0.4
carbon source D-Glucose 20mM (C) +0.5 -0.3 -1.0 +0.2 +0.2
stress Varel_Bryant_medium_Glucose with Sulfaquinoxaline 0.1 mM -0.1 +0.8 -0.6 -0.6 +0.6
mouse_peg_treatment PEG (Day 2) - Cage5;Mouse1 +0.5 -0.4 -0.7 +0.2 +0.5
carbon source Hyaluronic from Streptococcus equi +1.1 -0.3 -0.6 -0.1 +0.0
stress BHIS with Dimetridazole 0.025 mM -0.3 -0.8 -0.0 +1.0 +0.4
stress BHIS with Doxycycline hyclate 0.000390625 mM +1.3 -1.0 -0.1 +0.2 +0.2
stress Varel_Bryant_medium_Glucose with Sulfamethizole 0.2 mM +0.7 +0.5 -0.3 -0.5 +0.2
phage SJC15_cps8_1MOI +0.2 +1.1 +0.2 -0.9 -0.1
phage ARB14_cps1_0.1MOI +0.5 +0.6 +0.3 -0.5 -0.1
stress Varel_Bryant_medium_Glucose with Trimethoprim 0.0125 mM -0.6 +0.3 +0.7 +0.2 +0.3
stress BHIS with Vancomycin 0.016 mg/ml +0.8 +0.4 -0.6 +0.0 +0.3
stress BHIS with Thioridazine 0.0125 mM +1.1 +0.5 +0.0 -0.5 +0.1
phage SJC15_cps8_1MOI +0.5 +0.5 +0.7 -0.0 -0.5
phage SJC12_cps8_0.1MOI +0.6 +0.7 +0.5 -0.2 -0.3
stress BHIS with 5-Fluorouracil 0.2 mM +0.2 +0.3 +0.8 -0.5 +0.6
stress Varel_Bryant_medium_Glucose with 8-hydroxy-nitroquinoline 0.05 mM -0.6 +0.8 +0.5 +0.1 +0.6
stress BHIS with Chlorpromazine 0.1 mM +1.3 +0.2 +0.5 -0.5 +0.2
stress BHIS with Thioridazine 0.0125 mM +0.7 +0.8 +0.5 -0.2 +0.3
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